Alternatives and similar repositories for pubmed2doc

Users that are interested in pubmed2doc are comparing it to the libraries listed below

• rnabioco / practical-data-analysis
  Short course using RStudio for biological data analysis
  ☆14Updated 3 years ago
• DataBiosphere / data-browser
  ☆11Updated this week
• qasimyu / scssim
  a bioinformatics tool for simulating single-cell genome sequencing data
  ☆10Updated 5 years ago
• NCBI-Hackathons / PubRunner
  Framework for running text mining tools on latest publications. Main page at:
  ☆14Updated 3 years ago
• antigenomics / repseq-annotation-tutorial
  📝 [Tutorial] RepSeq data mining basics in R
  ☆11Updated 6 years ago
• biodatascience / datasci611
  Materials for Principles of Data Science BIOS 611
  ☆20Updated 6 years ago
• burkesquires / immunology-informatics
  Immunology Informatics - Big Data Analysis in Immunology - Tutorials
  ☆24Updated 8 years ago
• gevaertlab / MethylMix
  Identification of differentially methylated genes in biomedical data
  ☆15Updated 6 years ago
• nagornovys / Cancer_cell_evolution
  tugHall: a simulator of cancer cell evolution based on the hallmarks of cancer, linked to the mutational states of tumor-related genes. T…
  ☆13Updated 2 years ago
• oganm / geneSynonym
  Quick access to gene synonyms
  ☆29Updated last week
• Bioconductor / VariantAnnotation
  Annotation of Genetic Variants
  ☆30Updated last month
• NCBI-Hackathons / FlowBio
  A fast, easy way to present complex bioinformatics pipelines to biologists
  ☆11Updated 7 years ago
• DataBiosphere / data-portal
  ☆10Updated last week
• soumitag / SLIDE
  A visualization tool for Systems-Level Interactive Data Exploration
  ☆12Updated 3 years ago
• isglobal-brge / methylclock
  DNA methylation-based clocks
  ☆48Updated last year
• marcos-diazg / musica
  MuSiCa - Mutational Signatures in Cancer
  ☆23Updated last year
• kkdey / aRchaic
  Exploration, clustering, visualization and classification of DNA damage patterns
  ☆19Updated 4 years ago
• mdozmorov / Aging
  Epigenomic enrichment analysis of age-related genomic regions
  ☆16Updated 7 years ago
• idekerlab / ddot
  Toolkit for constructing, analyzing, and visualizing data-driven ontologies
  ☆17Updated 2 years ago
• dapogon / cellcoal
  CellCoal: coalescent simulation of single-cell NGS genotypes
  ☆15Updated 10 months ago
• MaayanLab / biojupies-plugins
  User-submitted RNA-seq data analysis tools for BioJupies.
  ☆20Updated 4 months ago
• ccmbioinfo / crg2
  Research pipeline for exploring clinically relevant genomic variants
  ☆16Updated 3 weeks ago
• lawremi / rtracklayer
  R interface to genome annotation files and the UCSC genome browser
  ☆35Updated this week
• tgirke / systemPipeR
  Project Website:
  ☆54Updated 5 months ago
• ctb / screed
  a simple read-only sequence database, designed for short reads
  ☆20Updated 8 years ago
• FAIR-biomed / FAIR-biomed
  Browser extension for accessing open data resources in the biomedical domain
  ☆11Updated 2 years ago
• akoch8 / mexpress
  MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.
  ☆14Updated 5 years ago
• Wittelab / orchid
  A novel management, annotation, and machine learning framework for analyzing cancer mutations
  ☆31Updated last year
• audy / bioinformatics-hacks
  Scripts for miscelleneous bioinformatics tasks
  ☆49Updated 5 years ago
• IMB-Computational-Genomics-Lab / ascend
  R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)
  ☆22Updated 6 years ago