YuLab-SMU / GOSemSimLinks
GO-terms Semantic Similarity Measures
☆63Updated last month
Alternatives and similar repositories for GOSemSim
Users that are interested in GOSemSim are comparing it to the libraries listed below
Sorting:
- Biomedical knowledge mining using GOSemSim and clusterProfiler☆77Updated last year
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated 2 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆61Updated 2 months ago
- Bayesian network plot for the enrichment analysis results☆64Updated 8 months ago
- Simplify functional enrichment results☆115Updated 8 months ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆49Updated 6 years ago
- Create KEGG.db Package☆60Updated 2 years ago
- A step-by-step tutorial for Weighted correlation network analysis (WGCNA)☆66Updated 3 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆109Updated 2 weeks ago
- A continually expanding collection of RNA-seq tools☆50Updated 7 months ago
- ☆57Updated 4 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆93Updated 8 months ago
- 🧬 Gene analysis toolkit based on R☆57Updated 5 months ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆51Updated 7 years ago
- ☆80Updated last year
- ☆48Updated 2 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- Epimap processing and analysis code repository☆33Updated 2 years ago
- Immunology-related bioinformatics data and tools☆73Updated last year
- R package containing useful functions for mutational signature analysis☆81Updated this week
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆74Updated 3 weeks ago
- Disease Ontology Semantic and Enrichment analysis☆119Updated last month
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- Personal notes about work- and coding-related topics☆20Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 3 months ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 6 years ago
- Code related to the Celligner manuscript☆46Updated 4 years ago
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆46Updated 5 months ago
- R package for the analysis of single-cell immune repertoires☆42Updated 3 months ago