Bioconductor / GenomicRanges
Representation and manipulation of genomic intervals
☆44Updated 3 months ago
Alternatives and similar repositories for GenomicRanges:
Users that are interested in GenomicRanges are comparing it to the libraries listed below
- An htmlwidget version of igv, for RStudio and Shiny apps☆37Updated 3 months ago
- Visualise correlation results and test significancies of these☆22Updated 5 years ago
- Glimma R package☆50Updated 6 months ago
- Explore design matrices interactively with R/Shiny☆37Updated 2 months ago
- Devel repository for minfi☆60Updated 10 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆43Updated 3 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- A tidy interface for coverage analysis☆24Updated 5 years ago
- Clone of the Bioconductor repository for the basilisk package.☆27Updated 2 weeks ago
- R package wrapping bedtools☆38Updated last week
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated 2 months ago
- Summer school course materials collection☆25Updated 6 years ago
- MSigDB gene sets for multiple organisms in a tidy data format☆72Updated last week
- DESeq2 or edgeR☆22Updated 8 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated 2 months ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- Project Website:☆53Updated 5 months ago
- ☆28Updated 7 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Bioconductor package that makes BIG data pint-sized.☆20Updated last year
- Quantify and interpret divers of variation in multilevel gene expression experiments☆61Updated last month
- ☆16Updated last year
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆28Updated 3 months ago
- the manifesto, workshops and tutorials of the tidy transcriptomics☆12Updated 9 months ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- Identify and correct invalid gene symbols☆59Updated 3 months ago
- Reduce + Visualize Gene Ontology☆24Updated 3 months ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆19Updated last year