Bioconductor / GenomicRanges
Representation and manipulation of genomic intervals
☆45Updated 2 months ago
Alternatives and similar repositories for GenomicRanges:
Users that are interested in GenomicRanges are comparing it to the libraries listed below
- An htmlwidget version of igv, for RStudio and Shiny apps☆37Updated 2 months ago
- Glimma R package☆50Updated 4 months ago
- Explore design matrices interactively with R/Shiny☆37Updated last month
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- Visualise correlation results and test significancies of these☆21Updated 4 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆43Updated 2 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- MSigDB gene sets for multiple organisms in a tidy data format☆70Updated last week
- ☆28Updated 6 months ago
- A tidy interface for coverage analysis☆24Updated 4 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated 3 weeks ago
- Make rapid visualizations of RNA-seq data in R☆18Updated 5 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆19Updated last year
- Clone of the Bioconductor repository for the basilisk package.☆27Updated 3 months ago
- Tutorial to reproduce the analysis of Peixoto et al. (2015)☆9Updated 9 years ago
- R package wrapping bedtools☆38Updated 5 months ago
- An R interface to the MEME Suite☆47Updated 3 months ago
- Devel repository for minfi☆60Updated 9 months ago
- Summer school course materials collection☆25Updated 6 years ago
- DESeq2 or edgeR☆22Updated 8 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆61Updated 3 weeks ago
- ☆16Updated last year
- Identify and correct invalid gene symbols☆57Updated 2 months ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆27Updated last month
- Functional enrichment analysis of high-throughput omics data☆20Updated 3 weeks ago
- An R for fast and flexible DNA methylation analysis☆31Updated 6 months ago
- Bioconductor package that makes BIG data pint-sized.☆20Updated 11 months ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆28Updated 2 months ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago