Alternatives and similar repositories for ReactomePA:

Users that are interested in ReactomePA are comparing it to the libraries listed below

• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆58Updated 5 months ago
• BIMSBbioinfo / genomation
  R package for genomic feature analysis and visualization
  ☆76Updated 3 weeks ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated last month
• UMMS-Biocore / debrowser
  Differential Count Data Analysis Toolbox
  ☆61Updated last year
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆68Updated 3 months ago
• JEFworks / liger
  Lightweight Iterative Gene set Enrichment in R
  ☆56Updated 7 months ago
• bioinformatics-core-shared-training / cruk-summer-school-2018
  Summer school course materials collection
  ☆26Updated 6 years ago
• oganm / geneSynonym
  Quick access to gene synonyms
  ☆27Updated last week
• sirselim / illumina450k_filtering
  A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
  ☆30Updated last year
• CompEpigen / methrix
  An R for fast and flexible DNA methylation analysis
  ☆32Updated 9 months ago
• pachterlab / kallisto-transcriptome-indices
  Reference transcriptome indices build from kallisto for popular organisms
  ☆42Updated last year
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆31Updated 3 months ago
• crazyhottommy / scRNA-seq-workshop-Fall-2019
  Harvard FAS informatics scRNAseq workshop website
  ☆37Updated 5 years ago
• PeeperLab / Rtoolbox
  Toolbox with R scripts
  ☆38Updated 6 years ago
• bvieth / powsimR
  Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…
  ☆106Updated last year
• Shians / Glimma
  Glimma R package
  ☆50Updated 8 months ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated 2 years ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆40Updated last month
• snystrom / memes
  An R interface to the MEME Suite
  ☆50Updated 6 months ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆23Updated 4 years ago
• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆23Updated 5 years ago
• sonali-bioc / UncertaintyRNA
  This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…
  ☆28Updated last year
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆20Updated last year
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• jokergoo / rGREAT
  GREAT Analysis - Functional Enrichment on Genomic Regions
  ☆87Updated last month
• kevinblighe / scDataviz
  scDataviz: single cell dataviz and downstream analyses
  ☆63Updated 3 years ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆45Updated 2 weeks ago
• SamBuckberry / RUN-WGCNA
  Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
  ☆28Updated 9 years ago
• randel / MIND
  Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution
  ☆45Updated 2 years ago
• YosefLab / scone
  ☆53Updated 2 months ago