YuLab-SMU / ReactomePA
Reactome Pathway Analysis
☆37Updated last week
Related projects ⓘ
Alternatives and complementary repositories for ReactomePA
- Transcript quantification import with automatic metadata detection☆67Updated 3 weeks ago
- An R Package for Geneset Enrichment Workflows☆76Updated 5 months ago
- Differential Count Data Analysis Toolbox☆60Updated 9 months ago
- Identify and correct invalid gene symbols☆55Updated 5 months ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆25Updated 3 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- Statistical power studies for multi-omics experiments.☆30Updated last year
- Quick access to gene synonyms☆26Updated last week
- An R interface to the MEME Suite☆45Updated last month
- Reference transcriptome indices build from kallisto for popular organisms☆41Updated 11 months ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆85Updated 3 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆35Updated this week
- R package wrapping bedtools☆37Updated 2 months ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆26Updated 2 months ago
- Glimma R package☆50Updated 2 months ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆29Updated 11 months ago
- Summer school course materials collection☆25Updated 6 years ago
- R package for genomic feature analysis and visualization☆74Updated 4 years ago
- Toolbox with R scripts☆37Updated 6 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 3 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆27Updated 5 years ago
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆27Updated 9 months ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆27Updated 9 years ago
- An R client for broads firehose pipeline, providing TCGA data sets☆60Updated 5 years ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆18Updated 7 years ago
- processes GoT amplicon data and generates a table of metrics☆26Updated 2 years ago
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆22Updated last year