Alternatives and similar repositories for ReactomePA:

Users that are interested in ReactomePA are comparing it to the libraries listed below

• UMMS-Biocore / debrowser
  Differential Count Data Analysis Toolbox
  ☆61Updated last year
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆59Updated 4 months ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated last month
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆67Updated last month
• Shians / Glimma
  Glimma R package
  ☆50Updated 6 months ago
• sirselim / illumina450k_filtering
  A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
  ☆30Updated last year
• CompEpigen / methrix
  An R for fast and flexible DNA methylation analysis
  ☆31Updated 7 months ago
• BIMSBbioinfo / genomation
  R package for genomic feature analysis and visualization
  ☆75Updated 5 years ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated 2 years ago
• oganm / geneSynonym
  Quick access to gene synonyms
  ☆26Updated this week
• ge11232002 / TFBSTools
  Software Package for Transcription Factor Binding Site (TFBS) Analysis
  ☆28Updated last week
• JEFworks / liger
  Lightweight Iterative Gene set Enrichment in R
  ☆57Updated 5 months ago
• SamBuckberry / RUN-WGCNA
  Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
  ☆28Updated 9 years ago
• icbi-lab / Immunophenogram
  ☆40Updated 6 years ago
• carpentries-incubator / bioc-rnaseq
  Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
  ☆22Updated last month
• PeeperLab / Rtoolbox
  Toolbox with R scripts
  ☆38Updated 6 years ago
• sonali-bioc / UncertaintyRNA
  This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…
  ☆28Updated last year
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆38Updated last month
• bioinformatics-core-shared-training / cruk-summer-school-2018
  Summer school course materials collection
  ☆25Updated 6 years ago
• pachterlab / kallisto-transcriptome-indices
  Reference transcriptome indices build from kallisto for popular organisms
  ☆42Updated last year
• Bioconductor / BiocIntro
  Course material for introductory R / Bioconductor courses
  ☆44Updated 2 years ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆44Updated 4 months ago
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated last week
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆30Updated 2 months ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆36Updated last week
• jokergoo / rGREAT
  GREAT Analysis - Functional Enrichment on Genomic Regions
  ☆86Updated last week
• crazyhottommy / scRNA-seq-workshop-Fall-2019
  Harvard FAS informatics scRNAseq workshop website
  ☆37Updated 5 years ago
• andrewparkermorgan / argyle
  An R package for import, QC and analysis of Illumina Infinium genotyping arrays
  ☆33Updated 7 years ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated last week
• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆22Updated 5 years ago