Bioconductor / GenomeInfoDbLinks
Utilities for manipulating chromosome names, including modifying them to follow a particular naming style
☆33Updated last month
Alternatives and similar repositories for GenomeInfoDb
Users that are interested in GenomeInfoDb are comparing it to the libraries listed below
Sorting:
- A container (S4 class) for matrix-like assays☆36Updated 2 months ago
- Template for building a bioconductor workshop package using github actions☆21Updated 6 months ago
- Toolbox package for organizing and working with TCGA data☆28Updated last month
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆28Updated 2 months ago
- This is the ensembldb development repository.☆36Updated 4 months ago
- Statistical power studies for multi-omics experiments.☆32Updated 11 months ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15Updated 8 months ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Updated last year
- R interface to genome annotation files and the UCSC genome browser☆35Updated 3 weeks ago
- 🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 �…☆47Updated last week
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆35Updated last year
- Bioconductor facilities for parallel evaluation☆69Updated 2 months ago
- Gene-level general linear mixed model☆24Updated 3 months ago
- R package for plotting 3D graphical visualization of multi-omics data.☆23Updated 3 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 months ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆26Updated last week
- Representation and manipulation of genomic intervals☆46Updated last month
- ☆63Updated 9 months ago
- Workshop materials for cBioPortal Webinar 5: API & R Client☆19Updated 5 years ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- Open-Source Software for Omic Data Analysis and Visualization☆40Updated this week
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- RNA-seq data comprehensive data analysis toolbox☆21Updated 3 years ago
- Transcript quantification import with automatic metadata detection☆67Updated last week
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆10Updated last year
- 🧠 Visualizing Single Cell and Spatial Transcriptomics☆50Updated 2 months ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 2 months ago
- GEO RNA-seq Experiments Processing Pipeline☆22Updated 6 years ago
- Brings SummarizedExperiment to the tidyverse☆29Updated 3 weeks ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆69Updated last month