Utilities for manipulating chromosome names, including modifying them to follow a particular naming style
☆33Dec 4, 2025Updated 4 months ago
Alternatives and similar repositories for GenomeInfoDb
Users that are interested in GenomeInfoDb are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A unified framework for working transparently with on-disk and in-memory array-like datasets☆28Updated this week
- Foundation of vector-like and list-like containers in Bioconductor☆17Updated this week
- High-performance sparse data representation and manipulation in R☆11Mar 31, 2026Updated last month
- A container (S4 class) for matrix-like assays☆37Updated this week
- S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects☆12Oct 30, 2025Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Representation and manipulation of genomic intervals☆46Updated this week
- Efficient manipulation of biological strings☆66Updated this week
- ☆31Sep 15, 2025Updated 7 months ago
- Foundation of integer range manipulation in Bioconductor☆23Updated this week
- Python Primer Design Library☆14Mar 27, 2026Updated last month
- v2.x of the microassembly based somatic variant caller☆25Updated this week
- Efficient genotyping bi-allelic SNPs on single cells☆159Oct 30, 2025Updated 6 months ago
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆29Updated this week
- A knowledge resource on cell lines - From SIB CALIPHO group☆14Jan 31, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆217Mar 20, 2026Updated last month
- A framework for performing single-cell and bulk read full-length analysis of mutations and splicing.☆60Apr 22, 2026Updated last week
- Disease Ontology Semantic and Enrichment analysis☆125Updated this week
- Portable database of microhaplotype marker and allele frequency data☆11Oct 2, 2025Updated 6 months ago
- t-distributed stochastic neighbor embedding for microbiota data☆12May 12, 2019Updated 6 years ago
- Demultiplexing pooled scRNA-seq data with or without genotype reference☆99Apr 11, 2025Updated last year
- ☆19Mar 19, 2026Updated last month
- CRAN Package For Managing Bioconductor Packages☆76Nov 13, 2025Updated 5 months ago
- R client for the OmniPath web service☆164Apr 21, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- a dataloader to work with large single cell datasets from lamindb☆40Apr 10, 2026Updated 3 weeks ago
- Helper script for bioconductor/bioconductor_docker☆13Mar 13, 2026Updated last month
- Methods for detecting doublets in single-cell sequencing data☆246Feb 12, 2026Updated 2 months ago
- An R package for performing cell typing in SMI and other single cell data☆49Apr 24, 2026Updated last week
- Interactively analyze single cell genomic data☆186Jan 14, 2026Updated 3 months ago
- ggplots for nested data☆10Jul 17, 2024Updated last year
- Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.☆176Jan 8, 2026Updated 3 months ago
- parallel differential expression for single-cell perturbation sequencing☆25Apr 7, 2026Updated 3 weeks ago
- Introduction to Computational Biology☆33Apr 13, 2026Updated 2 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Dec 8, 2020Updated 5 years ago
- R package for modeling single cell UMI expression data using regularized negative binomial regression☆256Jan 10, 2026Updated 3 months ago
- open source bagel recipe; let's raise the quality of bagels worldwide☆29Nov 3, 2024Updated last year
- Full-length transcriptome splicing and mutation analysis☆90Mar 23, 2026Updated last month
- Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …☆58Sep 17, 2024Updated last year
- Multi-sample multi-group scRNA-seq analysis tools☆226Apr 11, 2026Updated 2 weeks ago
- Differential ATAC-seq toolkit☆29Dec 21, 2023Updated 2 years ago