Ruitulyu / KAS-AnalyzerLinks
New computational framework to process and analyze KAS-seq and spKAS-seq data.
☆15Updated 2 years ago
Alternatives and similar repositories for KAS-Analyzer
Users that are interested in KAS-Analyzer are comparing it to the libraries listed below
Sorting:
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- Tools to analyze Dip-C (or other 3C/Hi-C) data☆74Updated last year
- ☆33Updated last year
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.☆24Updated 4 years ago
- single-cell clustering based on alternative splicing landscapes☆23Updated last year
- Pipeline for using IDR to produce a set of peaks given two replicate eCLIP peaks☆10Updated 3 years ago
- Estimate locus specific human LINE-1 expression.☆39Updated 3 weeks ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆65Updated last year
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆63Updated 2 months ago
- Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.☆52Updated 7 months ago
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆78Updated 2 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- Full-length transcriptome splicing and mutation analysis☆86Updated last year
- Analysis of Paired-Tag datasets☆43Updated 2 years ago
- ☆21Updated last year
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated last month
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆18Updated 6 months ago
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆77Updated last week
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Updated 2 months ago
- ☆49Updated 3 years ago
- ☆83Updated 9 months ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- ☆25Updated 4 years ago
- ☆23Updated 3 years ago
- DiffDomain is a statistically sound method for detecting differential TADs between conditions☆17Updated 7 months ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- SAMap: Mapping single-cell RNA sequencing datasets from evolutionarily distant organisms.☆88Updated last month
- A pipeline to process m6A-seq data and down stream analysis.☆44Updated 5 years ago
- ☆36Updated 3 years ago
- ☆53Updated 3 years ago