RitataLU / ATACgraphLinks
☆15Updated 2 years ago
Alternatives and similar repositories for ATACgraph
Users that are interested in ATACgraph are comparing it to the libraries listed below
Sorting:
- ☆31Updated 8 months ago
- ☆17Updated last year
- ☆23Updated 4 years ago
- ☆21Updated 5 months ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- Pan-transcriptomic phenotyping☆18Updated last month
- Transcriptome-wide network☆16Updated 6 years ago
- Script used to identify de novo variants from sequencing data.☆12Updated 8 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- HiC for copy Number variation and Translocation detection☆39Updated 4 years ago
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆27Updated 2 years ago
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- ☆38Updated 4 years ago
- GENome Organisation Visual Analytics☆16Updated 3 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- ☆13Updated 2 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 3 months ago
- ☆19Updated 2 years ago
- Workflow for Sequenza, cellularity and ploidy☆20Updated last week
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆20Updated 5 months ago
- Long read to rMATS☆32Updated 2 years ago
- TreeExp 2.0: Toolbox for analyzing expression evolution based on RNA-seq count data☆15Updated 6 years ago
- Statistically Significant loops from HiChIP data☆44Updated last year
- ☆11Updated 2 years ago
- ☆21Updated 5 years ago
- ☆13Updated 7 years ago
- Extract Sequence from Genome According to Annotation File☆37Updated 4 months ago
- Joint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the…☆22Updated 2 years ago
- ☆36Updated 6 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago