haiyuan-yu-lab / PIONEERLinks
☆28Updated 11 months ago
Alternatives and similar repositories for PIONEER
Users that are interested in PIONEER are comparing it to the libraries listed below
Sorting:
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- ☆47Updated last month
- Fast deep learning methods for large-scale protein-protein interaction screening☆107Updated 4 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆42Updated last year
- ColabFold protocol☆57Updated last year
- ☆96Updated 5 months ago
- AbEpiTope-1.0 is a computational tool that features two scores: AbEpiScore-1.0, designed for assessing the accuracy of modelled AbAg inte…☆25Updated 2 months ago
- Repository for mRNA Paper and CodonBERT publication.☆134Updated last year
- Predict the structure of immune receptor proteins☆57Updated last year
- PLM-interact: extending protein language models to predict protein-protein interactions.☆51Updated 3 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- Protein language model trained on coding DNA☆51Updated last year
- Evolutionary velocity with protein language models☆94Updated this week
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆21Updated 3 years ago
- ☆26Updated 5 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- ☆36Updated 10 months ago
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆40Updated last year
- Long disorder consensus predictor☆17Updated 3 months ago
- Neural networks for deep mutational scanning data☆70Updated 6 months ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆105Updated this week
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆75Updated 2 years ago
- ☆91Updated last year
- ☆75Updated 7 months ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 2 years ago
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆98Updated last month
- Biological prediction models made simple.☆46Updated 3 weeks ago
- Code repository for the SPOC tool for scoring binary AF-M predicitons.☆14Updated 7 months ago
- Primary RNA sequence model☆41Updated last year