☆34Dec 20, 2024Updated last year
Alternatives and similar repositories for PIONEER
Users that are interested in PIONEER are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Linux and MacOS codes to simulate protein transition pathways with eBDIMS2☆13Sep 26, 2026Updated last month
- an innovative strategy for missense mutant protein structures prediction based on AlphaFold2 and Molecular Dynamics Simulation☆13May 21, 2024Updated 2 years ago
- Environment for developing substructure-aware protein models☆16Mar 26, 2026Updated 7 months ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆71Aug 26, 2025Updated last year
- ☆327Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆13May 24, 2026Updated 5 months ago
- Prediction of Antibody CDR and protein loop flexibility☆18Sep 17, 2025Updated last year
- Protein Language Modeling beyond static folds reveals sequence-encoded flexibility☆37Feb 1, 2026Updated 9 months ago
- ☆17Dec 10, 2024Updated last year
- Automatic protein labelling in PyMOL☆12May 18, 2026Updated 5 months ago
- [JCIM 2026] Biasing Conformational Sampling in AlphaFold 3 and Boltz-2 via Pair Representation Scaling☆32Aug 20, 2026Updated 2 months ago
- ☆15Jun 24, 2025Updated last year
- Real-time structure motif searching in protein 3D structures using an inverted index strategy☆16Sep 13, 2026Updated last month
- STARLING - conSTruction of intrinsicAlly disoRdered proteins ensembles efficientLy vIa multi-dimeNsional Generative models☆81Oct 29, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆19Dec 23, 2024Updated last year
- Repository for Ruff, King et al. Molecular grammars of predicted intrinsically disordered regions that span the human proteome☆20Dec 29, 2025Updated 10 months ago
- A search engine for the identification of cross-linked protein complexes or proteomes from mass spectrometry data.☆14Sep 17, 2026Updated last month
- PyTorch Implementation of CLEAN-Contact: Contrastive Learning-enabled Enzyme Functional Annotation Prediction with Structural Inference☆11May 29, 2024Updated 2 years ago
- ☆14Oct 27, 2024Updated 2 years ago
- Graph neural network for modeling multispecific antibody functional data☆14Feb 2, 2026Updated 9 months ago
- Analysis on stop reasons☆10Jun 17, 2024Updated 2 years ago
- ☆10Nov 10, 2023Updated 2 years ago
- Transcriptional Inference using Gene Expression and Regulatory data☆10May 30, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Pretrained METL models with minimal dependencies☆18Sep 16, 2026Updated last month
- Discrete Cosine Spectral Diffusion for Protein Dynamics☆15Aug 31, 2026Updated 2 months ago
- Protein stability prediction using rewired protein generative models☆101Jul 15, 2026Updated 3 months ago
- CATH: high-throughput protein structure/function annotations☆12Dec 17, 2019Updated 6 years ago
- ☆105Updated this week
- DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions☆17Jun 18, 2026Updated 4 months ago
- [ICML'25] Diversifying Policy Behaviors via Extrinsic Behavioral Curiosity☆14Oct 28, 2025Updated last year
- Official Implementation of CompassDock☆21Feb 13, 2026Updated 8 months ago
- FeatureDock is a protein-ligand docking software guided by physicochemical feature-based local environment learning using Transformer☆44Oct 9, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- mcp server for pymol for conversational protein display☆16Updated this week
- Antibody structure prediction☆40Dec 16, 2025Updated 10 months ago
- ☆11Jan 31, 2026Updated 9 months ago
- A predictor of GPCR couplings with G-proteins/B-arrs using Transformers☆10Oct 23, 2026Updated 2 weeks ago
- ☆14Mar 31, 2025Updated last year
- ☆17Sep 29, 2023Updated 3 years ago
- PocketMaster is a flexible and automated tool for analyzing, clustering, and visualizing protein binding sites. It allows you to quickly …☆19Feb 22, 2026Updated 8 months ago