mims-harvard / ProCyon
ProCyon: A multimodal foundation model for protein phenotypes
☆32Updated 3 weeks ago
Alternatives and similar repositories for ProCyon:
Users that are interested in ProCyon are comparing it to the libraries listed below
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆38Updated 3 weeks ago
- Biological prediction models made simple.☆39Updated last month
- ☆25Updated 3 months ago
- Comprehensive Python client for the Uniprot REST API☆46Updated 7 months ago
- ☆63Updated last month
- Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in geno…☆40Updated 2 weeks ago
- Species-aware DNA language modeling☆18Updated 2 years ago
- Primary RNA sequence model☆35Updated 10 months ago
- Toolkit for training hyenaDNA-based autoregressive language models on DNA sequences.☆38Updated 5 months ago
- Evolutionary velocity with protein language models☆90Updated last year
- ☆66Updated 6 months ago
- GraphPart, a data partitioning method for ML on biological sequences☆25Updated last year
- Diverse Genomic Embedding Benchmark☆43Updated last week
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆73Updated 3 months ago
- Repository for mRNA Paper and CodonBERT publication.☆126Updated 9 months ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆58Updated 3 weeks ago
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆24Updated last year
- Protein language model trained on coding DNA☆46Updated 5 months ago
- ColabFold protocol☆50Updated 5 months ago
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆33Updated 3 weeks ago
- ☆71Updated last year
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆22Updated last month
- Results and data from the pilot round of the Protein Engineering Tournament☆28Updated last week
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆50Updated 11 months ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆26Updated 11 months ago
- Feature map and function annotation of Proteins☆32Updated 9 months ago
- a collection of colabs useful for molecular biology☆31Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆57Updated 8 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆37Updated last year