UMMS-Biocore / dolphinnext
A graphical user interface for distributed data processing of high throughput genomics
☆4Updated last year
Alternatives and similar repositories for dolphinnext:
Users that are interested in dolphinnext are comparing it to the libraries listed below
- Documentation and description of AWS iGenomes S3 resource.☆111Updated 3 months ago
- Example Nextflow pipelines and programming techniques☆105Updated 3 months ago
- A proof of concept of RNAseq pipeline☆77Updated last week
- A collection of reusable WDL tasks. Category:Other☆86Updated this week
- simple comparison of snakemake, nextflow and cromwell/wdl☆50Updated 4 years ago
- Genomic Interactive Visualization Engine☆145Updated 2 years ago
- NGS-pipe: next-generation sequencing pipelines for precision oncology☆109Updated 6 years ago
- GATK RNA-Seq Variant Calling in Nextflow☆134Updated 2 years ago
- A Python-based EGA download client☆98Updated 6 months ago
- Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders☆140Updated 3 weeks ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆101Updated 4 months ago
- FusionInspector code☆57Updated 4 months ago
- Mutation Identification Pipeline. Read the latest documentation:☆44Updated last year
- Extension for Jupyter which integrates igv.js☆154Updated 2 years ago
- Galaxy RNA workbench☆39Updated 4 years ago
- Testing building mulled containers for multi-requirement tools.☆71Updated this week
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 6 years ago
- A small-RNA sequencing analysis pipeline☆80Updated last month
- ☆82Updated 6 years ago
- Finder of Somatic Fusion Genes in RNA-seq data☆145Updated last year
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated last month
- CLI for interacting with Cromwell servers☆53Updated 11 months ago
- Software program for checking sample matching for NGS data☆129Updated 9 months ago
- Battenberg algorithm and associated implementation script☆52Updated 4 years ago
- New user☆42Updated 4 years ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆62Updated this week
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆144Updated 2 weeks ago
- RNA-Seq analysis workflow☆104Updated 3 years ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆45Updated 2 years ago