xuzhougeng / R-ChIP-data-analysisLinks
☆50Updated 7 years ago
Alternatives and similar repositories for R-ChIP-data-analysis
Users that are interested in R-ChIP-data-analysis are comparing it to the libraries listed below
Sorting:
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆66Updated last year
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 5 months ago
- release version☆56Updated 3 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆67Updated 2 years ago
- Allele-specific alignment sorting☆61Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- ☆60Updated 5 months ago
- Tutorial Website☆60Updated 4 years ago
- fork of RSeQC python RNAseq metrics suit of tools☆49Updated 6 years ago
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated 2 months ago
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs☆53Updated 5 months ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 6 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆76Updated last week
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆55Updated 10 months ago
- SNP-free RNA editing Identification Toolkit☆49Updated 11 months ago
- Links to ATAC-seq analysis tools☆74Updated 4 years ago
- An easy-to-use Hi-C data processing software supporting distributed computation.☆62Updated last year
- HiC uniform processing pipeline☆62Updated 2 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆78Updated 2 years ago
- Estimate locus specific human LINE-1 expression.☆39Updated last month
- Analysis pipeline for ATAC-seq Data☆62Updated 4 years ago
- Package for analysis and characterization of differential TADs☆26Updated 3 years ago
- RNA-Seq analysis workflow☆105Updated 4 years ago