xuzhougeng / R-ChIP-data-analysis
☆51Updated 6 years ago
Alternatives and similar repositories for R-ChIP-data-analysis:
Users that are interested in R-ChIP-data-analysis are comparing it to the libraries listed below
- Tutorial Website☆57Updated 4 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆43Updated 4 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆62Updated 8 months ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆66Updated 5 years ago
- Allele-specific alignment sorting☆54Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆57Updated last year
- release version☆51Updated 2 years ago
- fork of RSeQC python RNAseq metrics suit of tools☆48Updated 6 years ago
- ☆54Updated 3 years ago
- tools to find circRNAs in RNA-seq data☆42Updated 7 years ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆63Updated last year
- ATAC-seq processing pipeline☆32Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆48Updated 3 weeks ago
- ☆20Updated 5 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆31Updated 5 years ago
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs☆48Updated 2 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆38Updated 3 years ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆25Updated last month
- REDItools are python scripts to investigate RNA editing at genomic scale.☆62Updated 4 months ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆49Updated 5 years ago
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 6 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆43Updated 7 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated 10 months ago
- ☆32Updated 7 years ago
- Estimate locus specific human LINE-1 expression.☆33Updated 2 years ago
- ☆40Updated 2 years ago
- A list of alternative splicing analysis resources☆42Updated 4 months ago
- HMMRATAC peak caller for ATAC-seq data☆100Updated 4 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago