XiDsLab / scFusionLinks
☆22Updated 3 years ago
Alternatives and similar repositories for scFusion
Users that are interested in scFusion are comparing it to the libraries listed below
Sorting:
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆58Updated last month
- ☆52Updated last year
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.☆24Updated 4 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 4 years ago
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆20Updated last month
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Updated last month
- RNA editing tests☆17Updated 5 years ago
- single-cell clustering based on alternative splicing landscapes☆23Updated last year
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.☆37Updated 3 years ago
- ☆48Updated 11 months ago
- Snakemake pipeline for plate scATAC-seq processing☆26Updated 2 years ago
- Tools to analyze Dip-C (or other 3C/Hi-C) data☆72Updated last year
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆76Updated last week
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Analysis of Paired-Tag datasets☆43Updated last year
- An R package to time somatic mutations☆65Updated 5 years ago
- A count based method for detecting doublets from single nucleus ATAC-seq (snATAC-seq) data.☆31Updated 2 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- ☆32Updated last year
- A collection of tools to process single-cell omics datasets.☆50Updated 6 months ago
- Tutorial Website☆60Updated 4 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- ☆36Updated 3 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- ☆34Updated last year
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- ☆39Updated 5 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 3 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago