XiDsLab / scFusionLinks
☆21Updated 3 years ago
Alternatives and similar repositories for scFusion
Users that are interested in scFusion are comparing it to the libraries listed below
Sorting:
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆25Updated last year
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆68Updated last month
- ☆51Updated last year
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆51Updated last year
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.☆22Updated 3 years ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆29Updated 4 months ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 3 years ago
- Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes☆37Updated last year
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- Tutorial Website☆59Updated 4 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated 3 months ago
- RNA editing tests☆17Updated 4 years ago
- ☆47Updated 7 months ago
- An R package to time somatic mutations☆62Updated 4 years ago
- HiC for copy Number variation and Translocation detection☆39Updated 4 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Automate Absolute Copy Number Calling using 'ABSOLUTE' package☆39Updated last year
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆17Updated 5 months ago
- ☆38Updated 5 years ago
- Analysis of Paired-Tag datasets☆42Updated last year
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆60Updated 8 months ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated last month
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆30Updated last year
- ☆32Updated last year
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- Estimate locus specific human LINE-1 expression.☆37Updated 2 years ago