XiDsLab / scFusionLinks
☆23Updated 3 years ago
Alternatives and similar repositories for scFusion
Users that are interested in scFusion are comparing it to the libraries listed below
Sorting:
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆63Updated 2 months ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- ☆53Updated last year
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.☆24Updated 4 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆57Updated 4 years ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Updated last month
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆21Updated last week
- An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.☆39Updated 3 years ago
- ☆48Updated last year
- An R package to time somatic mutations☆65Updated 5 years ago
- Full-length transcriptome splicing and mutation analysis☆86Updated last year
- A list of alternative splicing analysis resources☆47Updated 10 months ago
- Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes☆38Updated last year
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- Tutorial Website☆63Updated 5 years ago
- RNA editing tests☆17Updated 5 years ago
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆77Updated this week
- ☆18Updated last year
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆64Updated 2 weeks ago
- A modular, containerized pipeline for ATAC-seq data processing☆61Updated 4 months ago
- ☆36Updated 3 years ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Updated 5 months ago
- Analysis of Paired-Tag datasets☆43Updated 2 years ago
- ☆33Updated last year
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆10Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆24Updated 2 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆24Updated last year
- Fork of the Polysolver project☆33Updated 6 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago