ShixiangWang / install_GISTIC
Install GISTIC2 by one line code; GISTIC2 docker image
☆40Updated last year
Related projects ⓘ
Alternatives and complementary repositories for install_GISTIC
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- ☆74Updated 10 months ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆46Updated 4 years ago
- ☆30Updated 2 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆88Updated last month
- ☆59Updated 2 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆43Updated 4 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆43Updated 3 months ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆72Updated 6 years ago
- ☆11Updated last year
- Analysis pipeline for ATAC-seq Data☆60Updated 3 years ago
- ☆95Updated last year
- A R package for advanced single cell data viz☆59Updated last year
- ☆10Updated 7 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆75Updated 2 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆33Updated 9 months ago
- ☆46Updated last year
- GLASS consortium☆37Updated 4 years ago
- Mollecular Functional Portraits☆36Updated 7 months ago
- An R package to time somatic mutations☆60Updated 3 years ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆75Updated 3 weeks ago
- ☆40Updated 3 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆31Updated 6 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 3 years ago
- Code repository for single cell RNA-seq☆32Updated 4 years ago
- An elegant package to visualize gene structures☆69Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆46Updated last year
- SNV calling from single cell sequencing☆84Updated last week
- my first R package just for testing☆42Updated 5 years ago
- ☆59Updated 4 years ago