ShixiangWang / install_GISTICLinks
Install GISTIC2 by one line code; GISTIC2 docker image
☆41Updated 2 years ago
Alternatives and similar repositories for install_GISTIC
Users that are interested in install_GISTIC are comparing it to the libraries listed below
Sorting:
- Multiscale embedded gene co-expression network analysis☆56Updated last year
- ☆71Updated 3 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆38Updated last year
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- Analysis pipeline for ATAC-seq Data☆62Updated 4 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆57Updated 3 weeks ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆81Updated 3 years ago
- Hypoxia associated molecular feature analysis☆36Updated 6 years ago
- ☆116Updated 3 months ago
- Repository for Cibersortx☆61Updated 4 years ago
- ☆88Updated 4 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆98Updated last year
- ☆33Updated 4 years ago
- ☆32Updated 8 years ago
- ☆88Updated 3 months ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆51Updated 5 years ago
- SCSA: cell type annotation for single-cell RNA-seq data☆92Updated 2 years ago
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 5 years ago
- An integrated platform for modeling gene-regulatory dynamics and networks☆33Updated 3 weeks ago
- SNV calling from single cell sequencing☆116Updated last year
- ☆20Updated 4 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- GLASS consortium☆42Updated 5 years ago
- ☆47Updated 11 months ago
- An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.☆37Updated 3 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆62Updated 2 years ago
- Homologous recombination deficiency in TCGA PanCancer Atlas☆28Updated 4 years ago
- Transcriptomics Visualization R package.☆74Updated 7 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆117Updated 4 months ago