hanjq17 / GeoTDMLinks
[NeurIPS 2024] The implementation for the paper "Geometric Trajectory Diffusion Models".
☆32Updated 6 months ago
Alternatives and similar repositories for GeoTDM
Users that are interested in GeoTDM are comparing it to the libraries listed below
Sorting:
- Source code for Equivariant Flow Matching for Molecular Conformer Generation☆59Updated 6 months ago
- Learning Joint 2D & 3D Diffusion Models for Complete Molecule Generation☆52Updated 2 years ago
- NeurIPS24: Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization☆41Updated 9 months ago
- Implementation for ICLR2024 Oral paper "Unified Generative Modeling of 3D Molecules with Bayesian Flow Networks"☆59Updated last year
- Implementation for NeurIPS 2023 paper "Equivariant Flow Matching with Hybrid Probability Transport for 3D Molecule Generation"☆41Updated last year
- [ICLR 2024] "Latent 3D Graph Diffusion" by Yuning You, Ruida Zhou, Jiwoong Park, Haotian Xu, Chao Tian, Zhangyang Wang, Yang Shen☆53Updated last year
- ☆10Updated last year
- The code for "Graph Diffusion Transformer for Multi-Conditional Molecular Generation"☆102Updated 7 months ago
- [ICLR 2025 Spotlight] Boltzmann-Aligned Inverse Folding Model as a Predictor of Mutational Effects on Protein-Protein Interactions☆43Updated 10 months ago
- This is the official implementation for Equivariant Enengy-guided SDE for Inverse Molecule Design (ICLR 2023)☆48Updated 2 years ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆75Updated last year
- The official implementation of DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design (ICML 2023)☆69Updated 2 years ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆101Updated 2 years ago
- Efficient 3D molecular generation with flow-matching and Semla☆52Updated 6 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆101Updated 8 months ago
- [AAAI 2023] The implementation for the paper "Energy-Motivated Equivariant Pretraining for 3D Molecular Graphs"☆33Updated last year
- NeuralMD for Protein-ligand Binding Simulation, Nature Communicaitons 2025 https://www.nature.com/articles/s41467-025-67808-z☆35Updated 2 months ago
- Implementation of ICML2023 paper : Coarse-to-Fine: a Hierarchical Diffusion Model for Molecule Generation in 3D☆50Updated 2 years ago
- Implementation for MOFFlow: Flow Matching for Structure Prediction of Metal-Organic Frameworks☆19Updated 5 months ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆74Updated 11 months ago
- A curated list of papers related to molecular diffusion models.☆82Updated 7 months ago
- MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation☆81Updated last year
- ☆60Updated last year
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆47Updated 2 years ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆105Updated 9 months ago
- A Group Symmetric Stochastic Differential Equation Model for Molecule Multi-modal Pretraining, ICML'23☆33Updated last year
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆31Updated last year
- ☆21Updated 6 months ago
- Projecting Molecules into Synthesizable Chemical Spaces (ICML 2024)☆58Updated last week
- Mixed continous/categorical flow-matching model for de novo molecule generation.☆176Updated last month