CaoTianze / plotnineseqsuiteLinks
plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style
☆16Updated 2 months ago
Alternatives and similar repositories for plotnineseqsuite
Users that are interested in plotnineseqsuite are comparing it to the libraries listed below
Sorting:
- Comprehensive Python client for the Uniprot REST API☆51Updated 2 months ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆59Updated this week
- Flexible analysis of high-content CRISPR screening☆31Updated last week
- Protein Sequence Annotation with Language Models☆23Updated 3 months ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆37Updated 2 months ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- ☆19Updated 9 months ago
- A PCR primer tool for DNA assembly flows☆33Updated last year
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆27Updated 7 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated last month
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆48Updated last month
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- Associated code for EvoWeaver publication☆15Updated 3 months ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆10Updated last month
- Multi-Omics Peptide Generator☆23Updated last week
- Deep learning embedding for nucleotide sequences☆19Updated 5 months ago
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Updated 7 months ago
- COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …☆17Updated 2 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆33Updated 2 years ago
- Protein structure alignment and search algorithm☆70Updated this week
- Cython bindings and Python interface to the MEME suite, a collection of tools for the analysis of sequence motifs.☆15Updated 3 months ago
- The tRNA adaptation index☆18Updated 4 months ago
- Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.☆35Updated 2 weeks ago
- Python package to plot sequence logos☆29Updated last year
- Software for predicting translation initiation rates in bacteria☆29Updated last month
- PRedictor of IMmunogenic Epitopes☆24Updated 3 months ago
- ☆11Updated 2 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆27Updated 6 months ago