☆36Feb 16, 2023Updated 3 years ago
Alternatives and similar repositories for nextflow-api
Users that are interested in nextflow-api are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- reference implementation of GA4GH WGS Quality Control Standards☆11Nov 25, 2025Updated 4 months ago
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated 10 months ago
- Research pipeline for exploring clinically relevant genomic variants☆16Updated this week
- ☆11Oct 21, 2016Updated 9 years ago
- GA4GH Quality Control of Whole Genome Sequencing's metrics definition, benchmark resources and reference implementations☆22Mar 12, 2026Updated 2 weeks ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Provides syntax highlighting for Apptainer/Singularity definition files.☆10Dec 24, 2025Updated 3 months ago
- Nextflow runs monitoring and organisation UI☆77Sep 20, 2024Updated last year
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 3 years ago
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 6 years ago
- A tool for creating resource prediction models for scientific workflows☆13Feb 27, 2024Updated 2 years ago
- TAPES : a Tool for Assessment and Prioritisation in Exome Studies☆25Sep 30, 2025Updated 5 months ago
- A library to assist with a variety of -omic analyses. Included are tools for proteomics, transcriptomics, and genomics.☆16Aug 3, 2023Updated 2 years ago
- SQL-like query language for the SAM/BAM file format☆29Sep 20, 2023Updated 2 years ago
- A curated collection of Nextflow implementation patterns☆369Nov 21, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆11May 26, 2023Updated 2 years ago
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆17Oct 12, 2023Updated 2 years ago
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 3 years ago
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆29Nov 27, 2025Updated 3 months ago
- Beginning Perl for Bioinformatics · 生物信息学 Perl 语言入门(中文版)☆22Nov 19, 2019Updated 6 years ago
- Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference☆14Nov 13, 2025Updated 4 months ago
- Nextflow Tower system☆153Jan 30, 2025Updated last year
- SARS-CoV-2 workflow for nanopore sequence data☆42Dec 15, 2025Updated 3 months ago
- Simple test framework for Nextflow pipelines☆178Mar 19, 2026Updated last week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40May 2, 2021Updated 4 years ago
- FLT3 ITD detection (ITDseek) and simulation (ITDsim)☆14Feb 27, 2019Updated 7 years ago
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 9 years ago
- Covid-19 HGI WES/WGS burden test BQC-19 pipeline☆16May 26, 2022Updated 3 years ago
- The Exome Coverage and Identification Report displays the coverage of every target region in your capture design. It also displays regio…☆14Apr 22, 2015Updated 10 years ago
- Warp Analysis Research Pipelines☆225Updated this week
- League of Legends Probuild clone in elixir☆12Jan 1, 2024Updated 2 years ago
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆12Dec 4, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13Updated this week
- A tool for running bioinformatics workflows locally or in the cloud.☆30Dec 13, 2019Updated 6 years ago
- UniCell Deconvolve Paper☆10Apr 25, 2023Updated 2 years ago
- A proof of concept RNA-Seq pipeline with Nextflow☆33Jan 13, 2021Updated 5 years ago
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- Config and setup to run nf-core/raredisease pipeline☆10Sep 11, 2025Updated 6 months ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Feb 12, 2026Updated last month