☆35Feb 16, 2023Updated 3 years ago
Alternatives and similar repositories for nextflow-api
Users that are interested in nextflow-api are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- reference implementation of GA4GH WGS Quality Control Standards☆11Nov 25, 2025Updated 6 months ago
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated last year
- As part of the COVID-19 Host Genetics Global initative, this repo serves to corroborate sample scripts for sequencing QC.☆12Jul 30, 2020Updated 5 years ago
- ☆11Oct 21, 2016Updated 9 years ago
- Provides syntax highlighting for Apptainer/Singularity definition files.☆10Dec 24, 2025Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Nextflow runs monitoring and organisation UI☆77Sep 20, 2024Updated last year
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated 8 months ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 3 years ago
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 7 years ago
- A tool for creating resource prediction models for scientific workflows☆13Feb 27, 2024Updated 2 years ago
- structural variant database software☆48Updated this week
- TAPES : a Tool for Assessment and Prioritisation in Exome Studies☆26Mar 26, 2026Updated 2 months ago
- A library to assist with a variety of -omic analyses. Included are tools for proteomics, transcriptomics, and genomics.☆16Aug 3, 2023Updated 2 years ago
- A curated collection of Nextflow implementation patterns☆371Nov 21, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆29Jun 9, 2020Updated 5 years ago
- ☆11May 26, 2023Updated 3 years ago
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆17Oct 12, 2023Updated 2 years ago
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 3 years ago
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆29Nov 27, 2025Updated 5 months ago
- Joint calling of gVCF, following GATK4 Best Practices☆12Apr 3, 2019Updated 7 years ago
- Beginning Perl for Bioinformatics · 生物信息学 Perl 语言入门(中文版)☆22Nov 19, 2019Updated 6 years ago
- Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference☆14Nov 13, 2025Updated 6 months ago
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Online platform to host your (Nextflow, Snakemake, ...) workflows with integrated result rendering.☆28Mar 10, 2026Updated 2 months ago
- Nextflow Tower system☆154Jan 30, 2025Updated last year
- SARS-CoV-2 workflow for nanopore sequence data☆42Apr 15, 2026Updated last month
- Simple test framework for Nextflow pipelines☆186Apr 27, 2026Updated 3 weeks ago
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40May 2, 2021Updated 5 years ago
- FLT3 ITD detection (ITDseek) and simulation (ITDsim)☆14Feb 27, 2019Updated 7 years ago
- Covid-19 HGI WES/WGS burden test BQC-19 pipeline☆16May 26, 2022Updated 4 years ago
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The Exome Coverage and Identification Report displays the coverage of every target region in your capture design. It also displays regio…☆14Apr 22, 2015Updated 11 years ago
- Warp Analysis Research Pipelines☆226Updated this week
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Nov 10, 2023Updated 2 years ago
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆13Dec 4, 2023Updated 2 years ago
- League of Legends Probuild clone in elixir☆12Jan 1, 2024Updated 2 years ago
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13May 19, 2026Updated last week
- A tool for running bioinformatics workflows locally or in the cloud.☆30Dec 13, 2019Updated 6 years ago