Variant Calling Pipeline in Cromwell/WDL
☆22Feb 22, 2020Updated 6 years ago
Alternatives and similar repositories for MayomicsVC
Users that are interested in MayomicsVC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 4 years ago
- run LMStudio within a Docker container☆19Mar 29, 2025Updated last year
- Training material for the GWAS Catalog REST API workshop☆13May 22, 2023Updated 2 years ago
- Hybrid method based on a variable-order de bruijn Graph for the error Correction of Long Reads☆11Jan 20, 2021Updated 5 years ago
- A package for detecting epistasis by machine learning☆21Jun 17, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Rapid RNA-seq pipeline using AWS lambda functions for alignment☆13Mar 22, 2019Updated 7 years ago
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Jan 24, 2020Updated 6 years ago
- Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.☆11May 9, 2020Updated 5 years ago
- single-nucleus nanopore reads processing pipeline☆16Aug 16, 2023Updated 2 years ago
- Variant Effect Prediction for Python☆16Apr 5, 2017Updated 9 years ago
- Docker container for Tripal☆10Mar 29, 2022Updated 4 years ago
- ☆14May 25, 2018Updated 7 years ago
- NGS perl modules☆10Updated this week
- Material for lectures and exercises of the SIB course "Advanced topics in single-cell transcriptomics" (May 2020)☆17May 29, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Reference-based compression of SRA data☆37Mar 26, 2013Updated 13 years ago
- TeraPCA is a multithreaded C++ software suite based on Intel's MKL library (or any other BLAS and/or LAPACK distribution). TeraPCA featur…☆15Jul 25, 2022Updated 3 years ago
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆33Mar 26, 2026Updated 2 weeks ago
- QTG_Finder, a QTL causal gene prioritization tool☆11Nov 9, 2024Updated last year
- Galaxy Docker Image with Tools for Genome Annotation☆12Apr 20, 2021Updated 4 years ago
- ☆12Aug 6, 2025Updated 8 months ago
- Luigi pipelines and Dockerized apps for bioinformatics and data science☆11Oct 2, 2018Updated 7 years ago
- Algorithms and datastructures for phylogenetics☆14Dec 24, 2025Updated 3 months ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Nov 25, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Integrated Variant Caller☆17Mar 15, 2018Updated 8 years ago
- ☆12Jul 3, 2017Updated 8 years ago
- Tool for demultiplexing Nanopore barcode sequence data☆25Mar 9, 2026Updated last month
- A collection of reusable WDL tasks. Category:Other☆88Updated this week
- ☆10Oct 15, 2025Updated 5 months ago
- Library to assist in the development of extractors for clowder.☆12Mar 18, 2025Updated last year
- A simple tool for extracting reads from Oxford Nanopore fast5 files☆26Sep 4, 2017Updated 8 years ago
- Machine learning tutorial for biologists, designed for Oz Single Cells 2019☆15Jul 21, 2019Updated 6 years ago
- ☆35Feb 20, 2020Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Implementation of the SPDY protocol in ocaml☆14Oct 2, 2011Updated 14 years ago
- Machine Learning for Spot Prices☆26Sep 9, 2019Updated 6 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Mar 4, 2019Updated 7 years ago
- Collection of galaxy tools developed by the artbio-platform at the IBPS (Institut de Biologie Paris-Seine)☆12Jan 16, 2026Updated 2 months ago
- Gene prediction in metagenomic sequences using Glimmer augmented by phylogenetic classification and clustering☆18Nov 3, 2015Updated 10 years ago
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Nov 30, 2020Updated 5 years ago
- Machine-curated database of genetic disease and genome-wide association studies☆57Apr 9, 2019Updated 7 years ago