PathOS is a clinical application for filtering, analysing and reporting on NGS variants
☆29Mar 30, 2021Updated 5 years ago
Alternatives and similar repositories for PathOS
Users that are interested in PathOS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Nov 19, 2019Updated 6 years ago
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Feb 20, 2026Updated 3 months ago
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13May 12, 2026Updated last week
- myVCF: a web-based platform for target and exome mutations data management☆21Apr 13, 2021Updated 5 years ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Mar 10, 2018Updated 8 years ago
- BrowseVCF is a web-based application and workflow to quickly prioritise disease-causative variants in VCF files.☆47Jun 26, 2020Updated 5 years ago
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated last year
- Generic human DNA variant annotation pipeline☆60Feb 13, 2024Updated 2 years ago
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆16Aug 9, 2018Updated 7 years ago
- Detection and Visualization of Exon-Level Copy Number Variants in Targeted Next Generation Sequencing Data☆18Nov 26, 2021Updated 4 years ago
- A tutorial for DLS-2 migration☆28Sep 16, 2019Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Automated human exome/genome variants detection from FASTQ files☆23Sep 27, 2021Updated 4 years ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 6 years ago
- Generate and process BAM files from Illumina sequencing instrument files☆23Feb 25, 2016Updated 10 years ago
- Gene Exploration System for Variance☆22Dec 8, 2022Updated 3 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆12Apr 15, 2026Updated last month
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 9 years ago
- Parse samtools pileup file to get how many bases and what kind of bases are called☆14Apr 30, 2024Updated 2 years ago
- Personal Cancer Genome Reporter (PCGR)☆277Updated this week
- ☆64Sep 21, 2016Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Read CRAM v3 and v2 in node or in the browser☆18May 8, 2026Updated last week
- VAPr: A Python package for NoSQL variant data storage, annotation and prioritization☆37Jun 30, 2021Updated 4 years ago
- Javascript Heatmap viewer☆32Dec 10, 2014Updated 11 years ago
- A modular annotation tool for genomic variants☆152May 11, 2026Updated last week
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- HPC based pipelines for variant calling using GATK☆17Apr 6, 2020Updated 6 years ago
- web-based analysis tool for rare disease genomics☆204Updated this week
- Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV…☆21Jun 30, 2020Updated 5 years ago
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆18Mar 10, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A project to launch the galaxy docker image easily using ansible☆11Jan 22, 2020Updated 6 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Jun 6, 2025Updated 11 months ago
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Jun 5, 2020Updated 5 years ago
- VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number va…☆22Dec 13, 2019Updated 6 years ago
- a pileup library that embraces the huge☆43Oct 2, 2020Updated 5 years ago
- PREFACE -- PREdict FetAl ComponEnt☆15Jan 2, 2026Updated 4 months ago