Skip the peaks and expose RNA-binding in CLIP data
☆10Jul 10, 2026Updated last week
Alternatives and similar repositories for skipper
Users that are interested in skipper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆42Sep 29, 2022Updated 3 years ago
- ☆13Updated this week
- Analysis pipeline for RNA structural probing mutational profiling data sequenced on Nanopore devices☆11Feb 10, 2024Updated 2 years ago
- 🧪 Optimized protocol for m6A-SAC-seq☆13Jun 16, 2025Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆22Jul 22, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Adds bulk image import from Google Drive to the Wagtail Admin☆11Mar 5, 2023Updated 3 years ago
- Collate data from Globus Search for easy discovery and transfer☆15Jul 1, 2026Updated 2 weeks ago
- Large-scale sparse matrix factorization for Rust☆11Apr 18, 2026Updated 3 months ago
- ☆13Apr 16, 2026Updated 3 months ago
- development of network co-localization tool☆17Mar 2, 2026Updated 4 months ago
- CLIP-seq Analysis of Multi-mapped reads☆32Jul 20, 2021Updated 5 years ago
- Fully Automated and Standardized (FAST) iCLIP analysis pipeline.☆22Oct 7, 2017Updated 8 years ago
- Systematic analyses of intronic polyadenylation from standard RNAseq data☆18Sep 10, 2024Updated last year
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆25Mar 20, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- The project for analyzing differential methylation of MeRIP-seq data☆24Sep 5, 2023Updated 2 years ago
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆32Aug 10, 2021Updated 4 years ago
- Weighted Nearest Neighbors Analysis implemented in Python (pyWNN)☆21Oct 7, 2021Updated 4 years ago
- Analyze 3'UTR usage in single-cell data.☆15Sep 25, 2021Updated 4 years ago
- Github Repository for multiOmics Integration project involving genomics, epigenomics and transcriptomics☆13Aug 7, 2020Updated 5 years ago
- Workflow to reproduce results and figures for the second BeatAML manuscript☆17Jun 28, 2022Updated 4 years ago
- R package for interacting with the Crunch API☆10Updated this week
- Comprehensive and scalable differential splicing analyses☆18Dec 19, 2025Updated 7 months ago
- ☆13Jan 23, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Jan 17, 2020Updated 6 years ago
- ☆13Jan 29, 2021Updated 5 years ago
- Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer☆19Aug 18, 2023Updated 2 years ago
- An R package for writing Geneva Graduate Institute documents☆11May 8, 2026Updated 2 months ago
- Matrix decomposition algorithms including PCA (principal component analysis) and ICA (independent component analysis)☆22Jun 16, 2026Updated last month
- polyApipe☆22Feb 10, 2025Updated last year
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆26Dec 5, 2024Updated last year
- RGenEDA package for exploratory data analysis☆17May 15, 2026Updated 2 months ago
- Analysis notebooks and data for AML hierarchies paper☆20Jun 28, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- TrendCatcher is an open source R-package that allows users to systematically analyze and visualize time course data. Please cite "Tempora…☆17May 20, 2025Updated last year
- A single-cell RNA-seq data generative model☆19Jan 11, 2025Updated last year
- Large language model Mistral for DNA☆24Sep 12, 2025Updated 10 months ago
- Official Repository for Westlake Deep Learning Course (2024)☆14Jun 6, 2024Updated 2 years ago
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- PythonによるシングルセルRNA-seq解析。☆23Dec 16, 2022Updated 3 years ago
- ☆15Jun 11, 2018Updated 8 years ago