y9c / pseudoU-BIDseqLinks
π§ͺ Pipeline for detecting Ξ¨ modification
β20Updated last year
Alternatives and similar repositories for pseudoU-BIDseq
Users that are interested in pseudoU-BIDseq are comparing it to the libraries listed below
Sorting:
- Estimate locus specific human LINE-1 expression.β39Updated 2 months ago
- Full-length transcriptome splicing and mutation analysisβ85Updated last year
- β51Updated 7 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.β69Updated 5 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seqβ63Updated 2 years ago
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanopβ¦β78Updated 2 years ago
- Tutorial Websiteβ62Updated 4 years ago
- An easy-to-use Hi-C data processing software supporting distributed computation.β62Updated last year
- Docker for 4DN Hi-C processing pipelineβ61Updated last year
- A tool for the calculation of RNA-editing index for RNA seq dataβ45Updated 2 months ago
- β60Updated 5 months ago
- β49Updated 3 years ago
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArcβ¦β76Updated last week
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related toolsβ84Updated 4 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort readsβ65Updated last year
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)β67Updated 6 years ago
- Quantification of transposable element expression using RNA-seqβ78Updated last year
- A Perl/R pipeline for plotting metagenesβ37Updated 4 years ago
- A list of alternative splicing analysis resourcesβ46Updated 9 months ago
- Estimation of Promoter Activity from RNA-Seq dataβ56Updated 5 months ago
- CLIP-seq Analysis of Multi-mapped readsβ31Updated 4 years ago
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAsβ54Updated this week
- tools to find circRNAs in RNA-seq dataβ44Updated 8 years ago
- A 3D genome data processing tutorial for ISMB/ECCB 2017β52Updated 8 years ago
- Genome-wide contact analysis using sklearnβ72Updated last year
- Allele-specific alignment sortingβ61Updated 3 years ago
- bioinformatic pipeline for GLORIβ22Updated last year
- Demultiplexes a fastq.β48Updated 5 years ago
- release versionβ57Updated 3 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.β44Updated 8 years ago