RitataLU / MethylC-analyzer

Related projects ⓘ

Alternatives and complementary repositories for MethylC-analyzer

• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated last year
• Nextomics / pipeline-for-isoseq
  A pipeline for isoseq
  ☆23Updated 6 years ago
• 4ureliek / TEanalysis
  Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
  ☆24Updated 5 years ago
• WGLab / LIQA
  Long-read Isoform Quantification and Analysis
  ☆39Updated 3 months ago
• liangfan01 / pipeline-for-isoseq
  ☆14Updated 6 years ago
• ksahlin / isONcorrect
  Error correction of ONT transcript reads
  ☆58Updated last year
• hangelwen / miR-PREFeR
  microRNA PREdiction From small RNA-seq data
  ☆29Updated 6 years ago
• christopher-vollmers / Mandalorion
  Pipeline to identify isoforms from full-length cDNA sequencing data
  ☆22Updated 5 months ago
• deLaatLab / pipe4C
  4C-seq processing pipeline
  ☆22Updated 6 months ago
• Magdoll / SQANTI2
  SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3
  ☆38Updated 4 years ago
• khuang28jhu / bs3
  BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
  ☆26Updated 5 years ago
• zyndagj / BSMAPz
  Updated and optimized fork of BSMAP
  ☆21Updated 3 years ago
• Sunhh / NGS_data_processing
  Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.
  ☆51Updated 2 weeks ago
• Uauy-Lab / WheatHomoeologExpression
  ☆15Updated 4 years ago
• adamewing / tldr
  Identify and annotate TE-mediated insertions in long-read sequence data
  ☆40Updated last year
• dieterich-lab / JACUSA2
  New version of JACUSA -> 2.0
  ☆23Updated 3 weeks ago
• DecodeGenetics / svimmer
  Structural variant merging tool
  ☆44Updated 2 months ago
• gaoyubang / nanom6A
  ☆19Updated last year
• dixonlab / hic_breakfinder
  ☆35Updated 5 years ago
• sunyumail93 / PipeRNAseq
  A comprehensive pipeline for RNAseq data analysis
  ☆22Updated 2 months ago
• kernco / functional-annotation
  Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.
  ☆22Updated 2 years ago
• BGI-shenzhen / BamDeal
  BamDeal: a comprehensive toolkit for bam manipulation
  ☆52Updated last year
• billzt / readfq
  A simple tool to calculate reads number and total base count in FASTQ file
  ☆20Updated 5 years ago
• hewm2008 / BamDeal
  BamDeal: a comprehensive toolkit for bam manipulation
  ☆13Updated last year
• Ensembl / treebest
  TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)
  ☆21Updated 5 years ago
• FAANG / analysis-TAGADA
  GENE-SWitCH project RNA-Seq analysis pipeline
  ☆23Updated 5 months ago
• weng-lab / TEMP2
  Algorithm to detect germline and de novo transposon insertions
  ☆26Updated 7 months ago
• carringtonlab / TargetFinder
  Plant small RNA target prediction tool
  ☆25Updated 7 years ago
• koszullab / hicstuff
  Simple library/pipeline to generate and handle Hi-C data.
  ☆37Updated 5 months ago
• yiliao1022 / Pepper3Dgenome
  ☆15Updated 2 years ago