RitataLU / MethylC-analyzerLinks
☆13Updated 2 years ago
Alternatives and similar repositories for MethylC-analyzer
Users that are interested in MethylC-analyzer are comparing it to the libraries listed below
Sorting:
- Long-read Isoform Quantification and Analysis☆38Updated 9 months ago
- ☆11Updated 3 weeks ago
- GENE-SWitCH project RNA-Seq analysis pipeline☆29Updated 10 months ago
- Simple library/pipeline to generate and handle Hi-C data.☆39Updated last year
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆15Updated last year
- ☆38Updated 2 years ago
- Updated and optimized fork of BSMAP☆23Updated 5 years ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆29Updated 6 years ago
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆64Updated last year
- New version of JACUSA -> 2.0☆30Updated last month
- ☆16Updated 3 years ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆34Updated 5 months ago
- microRNA PREdiction From small RNA-seq data☆31Updated 8 years ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆54Updated 3 years ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆99Updated last month
- A pipeline for isoseq☆23Updated 7 years ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆26Updated 3 months ago
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆29Updated 6 years ago
- FEELnc : FlExible Extraction of LncRNA☆92Updated 5 months ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 6 months ago
- ☆23Updated 3 years ago
- A Snakemake workflow for calling Fiber-seq Inferred Regulatory Elements (FIREs) on single molecules.☆28Updated last month
- Long read to rMATS☆32Updated 2 years ago
- ☆60Updated 5 months ago
- NANOME pipeline (Nanopore long-read sequencing consensus DNA methylation detection method and pipeline)☆34Updated last month
- TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)☆21Updated 6 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆15Updated 3 years ago
- ☆64Updated 3 months ago