Updated and optimized fork of BSMAP
☆24Dec 28, 2020Updated 5 years ago
Alternatives and similar repositories for BSMAPz
Users that are interested in BSMAPz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆20Mar 28, 2026Updated last month
- DCC/DAC methylation pipeline source☆56Jul 29, 2020Updated 5 years ago
- A (mostly) universal methylation extractor for BS-seq experiments.☆179Jun 21, 2024Updated last year
- Cluster-based analysis of CpG methylation☆13Jan 11, 2024Updated 2 years ago
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆32Jan 28, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An R for fast and flexible DNA methylation analysis☆36Dec 9, 2025Updated 5 months ago
- ☆18Apr 9, 2026Updated last month
- BISulfite-seq CUI Toolkit☆26Feb 17, 2026Updated 2 months ago
- Domain based annotation of transposable elements☆23Oct 8, 2025Updated 7 months ago
- A local realigner around InDels for MethylSeq data☆12Apr 28, 2016Updated 10 years ago
- BISulfite-seq CUI Toolkit☆69Oct 9, 2025Updated 6 months ago
- ☆19Feb 20, 2018Updated 8 years ago
- An integrated package to process diploid Hi-C data☆17Dec 9, 2021Updated 4 years ago
- ☆22Jul 2, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- runjob is a program for managing a group of related jobs running on a compute cluster☆11Mar 13, 2026Updated last month
- Higher level repo for aggregating all of Atlas workflow logic for Single Cell☆14Mar 31, 2026Updated last month
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆29Jul 5, 2019Updated 6 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Jun 13, 2023Updated 2 years ago
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Nov 10, 2021Updated 4 years ago
- direct RNA nanopore sequencing barcode design and demultiplexing☆20Apr 26, 2026Updated last week
- ☆40Jun 19, 2023Updated 2 years ago
- official repository for the UEA sRNA Workbench☆10May 31, 2023Updated 2 years ago
- fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome☆159May 2, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Compute mean telomere length from Whole Genome Sequencing data.☆15Feb 15, 2024Updated 2 years ago
- An R package to interpret biological trends from DNA methylation data☆18May 24, 2022Updated 3 years ago
- BitMapperBS: a fast and accurate read aligner for whole-genome bisulfite sequencing☆31Sep 15, 2019Updated 6 years ago
- ☆14May 1, 2026Updated last week
- ShortStack: Comprehensive annotation and quantification of small RNA genes☆100Oct 23, 2025Updated 6 months ago
- ☆16May 8, 2023Updated 3 years ago
- Tools for analyzing DNA methylation data☆45Feb 15, 2026Updated 2 months ago
- Tools for working with WGBS data☆14Jul 3, 2017Updated 8 years ago
- ☆20Sep 5, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A chronological age predictor based on DNA methylation☆22Mar 14, 2024Updated 2 years ago
- R package for DNA methylation analysis☆20Aug 18, 2024Updated last year
- Read level DNA methylation analysis of bisulfite converted sequencing data☆19Feb 23, 2026Updated 2 months ago
- A software for calculating telomere length☆76Oct 24, 2018Updated 7 years ago
- CWL for GDC DNASeq workflows☆23Mar 30, 2026Updated last month
- microRNA PREdiction From small RNA-seq data☆32Dec 28, 2017Updated 8 years ago
- A Pipeline to Process RNAseq Data☆17Jun 15, 2022Updated 3 years ago