Philyzh8 / scTAG
"ZINB-based Graph Embedding Autoencoder for Single-cell RNA-seq Interpretations" in AAAI 2022
☆21Updated 2 years ago
Alternatives and similar repositories for scTAG:
Users that are interested in scTAG are comparing it to the libraries listed below
- ☆21Updated 3 years ago
- single-cell graph attentional clustering☆12Updated 3 years ago
- CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure☆16Updated 6 months ago
- a unified single-cell data integration framework by optimal transport☆35Updated 6 months ago
- Single-Cell Multimodal Prediction via Transformer☆26Updated last year
- Deep soft K-means clustering with self-training for single cell RNA sequence data☆25Updated 4 years ago
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆16Updated 3 years ago
- ☆17Updated 3 years ago
- CLEAR: Self-supervised contrastive learning for integrative single-cell RNA-seq data analysis☆33Updated 2 years ago
- Single-cell biological network inference using a heterogeneous graph transformer☆72Updated last month
- scDCC: Single Cell Deep Constrained Clustering☆40Updated 8 months ago
- Single-cell spatial elucidation through image-augmented graph transformer☆31Updated last year
- scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models☆27Updated 7 months ago
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆32Updated 8 months ago
- ☆27Updated last year
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆19Updated 9 months ago
- Single cell joint embedding and modality prediction with autoencoder☆9Updated 2 years ago
- ☆19Updated 5 months ago
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆26Updated last year
- Cell clustering for spatial transcriptomics data with graph neural network☆59Updated 2 years ago
- ☆18Updated 3 years ago
- ☆14Updated 3 years ago
- scDeepCluster for Single Cell RNA-seq data☆100Updated 8 months ago
- An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"☆17Updated last year
- Identify spatial domain☆69Updated last year
- scPretrain: Multi-task self-supervised learning for cell type classification☆23Updated 3 years ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆49Updated 3 years ago
- Deep joint-leaning single-cell multi-omics model☆16Updated 2 years ago
- ☆27Updated 2 years ago
- single-cell graph autoencoder☆21Updated 3 years ago