myles-lewis / glmmSeqLinks
Gene-level general linear mixed model
☆22Updated 5 months ago
Alternatives and similar repositories for glmmSeq
Users that are interested in glmmSeq are comparing it to the libraries listed below
Sorting:
- R package for benchmarking single cell analysis methods☆31Updated last year
- ☆24Updated last month
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆21Updated 2 weeks ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆13Updated 6 months ago
- ☆28Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 3 months ago
- An R package to plot interactive three-way differential expression analysis☆38Updated last year
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated this week
- Repository for supplemental material of manuscripts☆18Updated 4 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- Clone of the Bioconductor repository for the scRNAseq package.☆28Updated 5 months ago
- Automatic selection of number of principal components☆16Updated 3 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆17Updated 6 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆20Updated 2 years ago
- This R package for performing module repertoire analyses and generating fingerprint representations☆16Updated 3 years ago
- A General Framework for Consensus Partitioning☆62Updated 5 months ago
- BioCarta pathway images☆11Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- An R package for visualising cell-cell interactions☆44Updated 11 months ago