myles-lewis / glmmSeq
Gene-level general linear mixed model
☆21Updated 3 months ago
Alternatives and similar repositories for glmmSeq:
Users that are interested in glmmSeq are comparing it to the libraries listed below
- R package for benchmarking single cell analysis methods☆31Updated last year
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- ☆24Updated 2 years ago
- R package for Flexible dot plots☆29Updated 2 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- Calculation of distance metrics for matrices☆25Updated 6 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Single-cell RNA Processing Software☆11Updated 6 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 2 weeks ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆13Updated 4 months ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆20Updated last year
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆17Updated 3 years ago
- An R package to analyze single-cell V(D)J data☆25Updated last year
- Collection of useful methods for single cell analysis☆14Updated 8 months ago
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆20Updated 9 months ago
- An R package for visualising cell-cell interactions☆44Updated 8 months ago
- Clone of the Bioconductor repository for the basilisk package.☆27Updated last week
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆14Updated 5 years ago
- ☆27Updated last year
- Flexible, probablistic metrics for quality control of scRNA-seq data☆20Updated 2 years ago
- An R package to plot interactive three-way differential expression analysis☆37Updated last year
- BioCarta pathway images☆11Updated last year
- Pairwise Hierarchical Model☆17Updated 3 years ago