Alternatives and similar repositories for UniDec

Users that are interested in UniDec are comparing it to the libraries listed below

• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆39Updated 2 months ago
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated last year
• pnnl / deimos
  ☆34Updated last month
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆21Updated last month
• BlaisProteomics / multiplierz
  The Multiplierz Proteomics Library
  ☆24Updated last year
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated 2 weeks ago
• HUPO-PSI / ProForma
  HUPO-PSI Standardized peptidoform notation
  ☆19Updated 2 months ago
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆55Updated last year
• sirius-ms / sirius
  SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…
  ☆109Updated 2 weeks ago
• XiminHu / mass-suite
  ☆26Updated last year
• bittremieux-lab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆29Updated last month
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆37Updated 3 weeks ago
• CompOmics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆66Updated last month
• frallain / pymsfilereader
  Thermo MSFileReader Python bindings
  ☆69Updated 4 years ago
• MatteoLacki / IsoSpec
  Libraries for fine isotopic structure calculator.
  ☆40Updated 2 weeks ago
• levitsky / pyteomics
  Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…
  ☆129Updated last week
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆30Updated last year
• pnnl / darkchem
  ☆32Updated 7 months ago
• xxao / mMass
  Mass Spectrometry Tool
  ☆24Updated last year
• mobiusklein / psims
  A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML
  ☆22Updated 5 months ago
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆48Updated last month
• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆64Updated this week
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated 7 months ago
• JamesJeffryes / pyclassyfire
  A python client for the ClassyFire API
  ☆16Updated 5 years ago
• MannLabs / alphatims
  An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…
  ☆88Updated 2 weeks ago
• wfondrie / depthcharge
  A deep learning toolkit for mass spectrometry
  ☆81Updated 11 months ago
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆47Updated 5 months ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆28Updated 6 months ago
• OpenMS / pyopenms_viz
  Streamlining Mass Spectrometry Data Visualization with Pandas
  ☆17Updated 2 months ago
• bittremieux-lab / spectrum_utils
  Python package for efficient mass spectrometry data processing and visualization
  ☆152Updated 3 months ago