Alternatives and similar repositories for UniDec

Users that are interested in UniDec are comparing it to the libraries listed below

• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆40Updated last week
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆21Updated 2 months ago
• OpenMS / pyopenms_viz
  Streamlining Mass Spectrometry Data Visualization with Pandas
  ☆18Updated last week
• BlaisProteomics / multiplierz
  The Multiplierz Proteomics Library
  ☆24Updated last year
• mobiusklein / psims
  A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML
  ☆22Updated 6 months ago
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated last month
• pnnl / deimos
  ☆35Updated 2 months ago
• MatteoLacki / IsoSpec
  Libraries for fine isotopic structure calculator.
  ☆40Updated last month
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆48Updated 5 months ago
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated last year
• PNNL-Comp-Mass-Spec / Thermo-Raw-File-Reader
  .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific
  ☆38Updated 3 weeks ago
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆56Updated last year
• frallain / pymsfilereader
  Thermo MSFileReader Python bindings
  ☆69Updated 4 years ago
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆49Updated last month
• HUPO-PSI / ProForma
  HUPO-PSI Standardized peptidoform notation
  ☆20Updated 2 months ago
• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆67Updated 2 weeks ago
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆45Updated 3 years ago
• levitsky / pyteomics
  Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…
  ☆132Updated 2 weeks ago
• sirius-ms / sirius
  SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…
  ☆110Updated last week
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆39Updated last week
• bittremieux-lab / spectrum_utils
  Python package for efficient mass spectrometry data processing and visualization
  ☆154Updated 4 months ago
• XiminHu / mass-suite
  ☆27Updated last year
• MannLabs / alphatims
  An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…
  ☆88Updated last month
• CompOmics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆68Updated 3 weeks ago
• xxao / mMass
  Mass Spectrometry Tool
  ☆24Updated last year
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆31Updated 2 years ago
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆46Updated last week
• pymzml / pymzML
  pymzML - an interface between Python and mzML Mass spectrometry Files
  ☆175Updated last month
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆24Updated 3 months ago
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated 8 months ago