pFindStudio / pDeepXLLinks
pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning
☆12Updated 4 years ago
Alternatives and similar repositories for pDeepXL
Users that are interested in pDeepXL are comparing it to the libraries listed below
Sorting:
- Collisional cross-section prediction for modified and multiconformational peptides☆13Updated 2 weeks ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆73Updated 3 weeks ago
- XiSearch☆15Updated last week
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆34Updated 2 years ago
- pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning☆42Updated 6 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆48Updated 2 weeks ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆44Updated last year
- ☆12Updated last week
- Python package for investigating the structural context of PTMs☆28Updated last year
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated last month
- ☆21Updated 11 months ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆15Updated 2 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 11 months ago
- ☆10Updated this week
- MS/MS prediction for peptides☆24Updated 5 years ago
- An open-source Python package to unify raw MS data accession and storage.☆31Updated last week
- ☆15Updated 3 years ago
- ☆18Updated 6 years ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆24Updated last year
- Automatically exported from code.google.com/p/kojak-ms☆13Updated 9 months ago
- Democratizing ML in proteomics☆52Updated last week
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆25Updated 2 years ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Updated 7 months ago
- A small library to provide peak picking for software processing mass spectrometry data☆23Updated last year
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆30Updated last year
- HUPO-PSI Standardized peptidoform notation☆23Updated 2 months ago
- Deep learning framework for proteomics☆144Updated last week
- ☆15Updated last year
- Streamlining Mass Spectrometry Data Visualization with Pandas☆21Updated last week
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Updated 3 years ago