OpenGene / awesome-bio-datasetsLinks
awesome-bio-datasets
☆240Updated 8 years ago
Alternatives and similar repositories for awesome-bio-datasets
Users that are interested in awesome-bio-datasets are comparing it to the libraries listed below
Sorting:
- A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.☆318Updated 9 months ago
- Python Programming for Biologists☆141Updated 2 months ago
- genes and genomes at your fingertips☆404Updated 2 months ago
- Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data☆212Updated 5 years ago
- Bioinformatics Workbook repository☆196Updated 3 months ago
- List of gene lists for genomic analyses.☆223Updated 3 years ago
- Code and examples for JHU Computational Genomics class☆303Updated last year
- DNA sequencing analysis notes from Ming Tang☆148Updated 2 years ago
- Solutions to Rosalind Bioinformatics Problems☆74Updated 12 years ago
- Short lessons from FAS Informatics coffee hour☆154Updated 2 years ago
- This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file …☆128Updated 5 years ago
- Training requirements for joining projects☆83Updated last year
- web-based analysis tool for rare disease genomics☆196Updated this week
- Model zoo for genomics☆172Updated last year
- A collection of scripts and notes related to genomics and bioinformatics☆217Updated this week
- Personal Cancer Genome Reporter (PCGR)☆273Updated 2 months ago
- Warp Analysis Research Pipelines☆221Updated last week
- A curated and summarized list of bioinformatics bench-marking papers and resources.☆349Updated last month
- NGS-pipe: next-generation sequencing pipelines for precision oncology☆114Updated 6 years ago
- An ensemble approach to accurately detect somatic mutations using SomaticSeq☆201Updated 4 months ago
- Jupyter notebook based genomic data visualization toolkit.☆249Updated last week
- Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workf…☆167Updated 2 weeks ago
- NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection☆173Updated 3 years ago
- Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing☆173Updated last year
- DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) …☆252Updated 9 months ago
- Customizable workflows based on snakemake and python for the analysis of NGS data☆397Updated last week
- A basic introduction to Biopython, intended for a classroom based workshop. Now on Codeberg.☆225Updated 5 years ago
- ☆185Updated 2 years ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆128Updated 5 years ago
- Detect and visualize target mutations by scanning FastQ files directly☆156Updated 3 years ago