For original Nature Biotechnology Publication (Q1 2012)
☆27Jul 9, 2017Updated 9 years ago
Alternatives and similar repositories for HugeSeq
Users that are interested in HugeSeq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Mar 17, 2016Updated 10 years ago
- A tool for detecting CNVs from WGS data☆11Jul 9, 2020Updated 6 years ago
- perform genotype-phenotype-association tests on a VCF with logistic regression.☆20Dec 15, 2015Updated 10 years ago
- Computes various SV statistics☆13Oct 12, 2023Updated 3 years ago
- A fork of the project Excavator2 from sourceforge.☆10Jun 29, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆179Aug 22, 2024Updated 2 years ago
- Tools for processing and analyzing structural variants.☆158May 2, 2022Updated 4 years ago
- A tool to call somatic single nucleotide variants.☆41Aug 21, 2015Updated 11 years ago
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Dec 7, 2022Updated 3 years ago
- This python script can be used to detect Whole-genome duplication (WGD) with the dS based method.☆26Feb 22, 2019Updated 7 years ago
- ☆11Mar 5, 2025Updated last year
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 10 years ago
- CAVA (Clinical Annotation of VAriants)☆14Sep 28, 2018Updated 8 years ago
- Hemang Parikh☆11Jan 12, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Software for "Secure genome-wide association analysis using multiparty computation", Nature Biotechnology, 2018☆20Aug 16, 2018Updated 8 years ago
- Tools for inference of the DFE with dadi☆15Apr 16, 2021Updated 5 years ago
- A Swiss army knife for genome projects☆15Aug 13, 2013Updated 13 years ago
- Tool for comparing mutation calls in VCF format☆12Sep 7, 2013Updated 13 years ago
- Awk, bash, python scripts for processing NGS data☆14Nov 6, 2015Updated 10 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Jun 30, 2017Updated 9 years ago
- repository for the code featured in the blog☆22Jan 31, 2009Updated 17 years ago
- ☆98Jan 11, 2022Updated 4 years ago
- Strain/species identification in metagenomes using genome-specific markers☆10Aug 17, 2015Updated 11 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automatic quality control for FASTQ sequencing files☆13Feb 27, 2018Updated 8 years ago
- Generate unique KMERs for every contig in a FASTA file☆49Aug 17, 2022Updated 4 years ago
- Read visualizer for structural variants☆85Aug 18, 2018Updated 8 years ago
- BlueSNP☆15Apr 14, 2014Updated 12 years ago
- maze: match visualizer☆10Oct 11, 2021Updated 5 years ago
- Framework for running bioinformatic workflows and pipelines using the Google Pipelines API as the underlying task-runner.☆12Mar 22, 2017Updated 9 years ago
- GTEx analysis scripts☆20Mar 14, 2017Updated 9 years ago
- Visualize next generation sequencing reads over putative structural variants☆13Aug 25, 2014Updated 12 years ago
- SV detection from paired end reads mapping☆118Jul 31, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ♥ Efficient Estimation of Evolutionary Distances☆47Sep 8, 2026Updated last month
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆35Sep 25, 2026Updated last month
- Programs used in the lab for various tasks☆14Jul 3, 2026Updated 3 months ago
- An efficient Variant-Caller to highlight low allele-frequency tumor mutations in a clinical practice☆10Jun 5, 2023Updated 3 years ago
- The code for Daugherty, et al 2017 - Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans☆11Aug 24, 2017Updated 9 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆107Mar 11, 2019Updated 7 years ago
- ☆12Mar 12, 2026Updated 7 months ago