Detect and visualize target mutations by scanning FastQ files directly
☆156Feb 10, 2022Updated 4 years ago
Alternatives and similar repositories for MutScan
Users that are interested in MutScan are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Gene fusion detection and visualization☆132Feb 21, 2022Updated 4 years ago
- Pattern Recognition for Cell-free DNA☆59Aug 3, 2018Updated 8 years ago
- Generate duplex/single consensus reads to reduce sequencing noises and remove duplications☆126Oct 27, 2023Updated 2 years ago
- Query Mutated Reads from a Bam☆26Nov 26, 2018Updated 7 years ago
- Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data☆213May 14, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A fast lossless FASTQ compressor with ultra-high compression ratio☆154May 28, 2025Updated last year
- (No maintenance) Next Generation Sequencing Simulation with SNP, Variation and Sequencing Error Integrated☆24Aug 10, 2017Updated 9 years ago
- Detect and visualize microsatellite instability(MSI) from NGS data☆33Jun 4, 2019Updated 7 years ago
- (No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia☆66Jul 18, 2022Updated 4 years ago
- (No maintenance) Detect gene fusion directly from raw fastq files☆25Aug 13, 2017Updated 9 years ago
- An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infect…☆120Oct 27, 2023Updated 2 years ago
- A simplified pipeline for ctDNA sequencing data analysis☆38Sep 23, 2017Updated 8 years ago
- identifying mutational significance in cancer genomes☆61Nov 16, 2022Updated 3 years ago
- Personal Cancer Genome Reporter (PCGR)☆283Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A flexible framework for rapid genome analysis and interpretation☆320Oct 18, 2022Updated 3 years ago
- An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)☆2,429Sep 10, 2026Updated last week
- awesome-bio-datasets☆243Oct 28, 2017Updated 8 years ago
- Structural variant and indel caller for mapped sequencing data☆467Oct 11, 2025Updated 11 months ago
- VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number va…☆22Dec 13, 2019Updated 6 years ago
- Strelka2 germline and somatic small variant caller☆393Apr 20, 2026Updated 5 months ago
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆166Mar 28, 2023Updated 3 years ago
- a lightweight bam file depth statistical tool☆163Jul 2, 2026Updated 2 months ago
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Jun 5, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA