MedTagger is a light weight clinical NLP system built upon Apache UIMA.
☆74Apr 10, 2026Updated 6 months ago
Alternatives and similar repositories for MedTagger
Users that are interested in MedTagger are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Provides backbone infrastructure elements for OHNLP toolsets.☆14May 6, 2025Updated last year
- A Serverless Text Annotation Tool for Corpus Development☆64Feb 19, 2025Updated last year
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Dec 8, 2022Updated 3 years ago
- ☆18Oct 30, 2020Updated 5 years ago
- Clinical Language Annotation Modeling and Processing toolkit☆17Oct 10, 2016Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A collaborative guidebook for reusable data best practices☆13Mar 5, 2023Updated 3 years ago
- ETUDE (Evaluation Tool for Unstructured Data and Extractions) is a Python-based tool that provides consistent evaluation options across a…☆12Jul 22, 2022Updated 4 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆66Jul 10, 2025Updated last year
- BioMedICUS: A biomedical and clinical NLP engine.☆21Oct 22, 2025Updated last year
- Library for clinical NLP with spaCy.☆684Jun 4, 2026Updated 4 months ago
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆20Jun 18, 2022Updated 4 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆64Jul 1, 2022Updated 4 years ago
- MedXN is a medication normalization system built upon Apache UIMA framework.☆25Jan 24, 2024Updated 2 years ago
- OMOP <-> FHIR mapper☆11Mar 6, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A collaborative framework for annotating medical datasets using crowdsourcing.☆124Nov 22, 2022Updated 3 years ago
- Model Context Protocol (MCP) server for mapping clinical terminology to Observational Medical Outcomes Partnership (OMOP) concepts using …☆41May 11, 2026Updated 5 months ago
- An R package for evaluating phenotype algorithms.☆22Oct 22, 2026Updated last week
- ACT COVID Ontology☆15Sep 30, 2021Updated 5 years ago
- Code and webpages for our study on teaching humans to defer to an AI☆12Nov 6, 2023Updated 2 years ago
- ☆19Apr 8, 2024Updated 2 years ago
- System for Medical Concept Extraction and Linking☆455Aug 12, 2024Updated 2 years ago
- BMSC-GA 4493 Deep Learning in Medicine - Spring 2020☆11Apr 29, 2020Updated 6 years ago
- Data structures and code to read/write BioC XML and Json.☆34Aug 21, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- mimic4fhir converts data from MIMIC IV database (PostgreSQL) to HL7 FHIR R4 resources or the German Medical Informatics Initiative core d…☆12Jul 1, 2022Updated 4 years ago
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆36Jun 1, 2026Updated 4 months ago
- This is the repository for the open source code of the distributed data network platform PopMedNet☆12Nov 5, 2024Updated last year
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆102Apr 24, 2024Updated 2 years ago
- This repository contains codes for Timeline model☆10Dec 18, 2018Updated 7 years ago
- ☆10Feb 17, 2023Updated 3 years ago
- Supporting multi-center research requires combining data created in different data models; this community coordination project aims to pr…☆17Mar 27, 2020Updated 6 years ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆183Oct 19, 2026Updated last week
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆157Sep 13, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆13Nov 14, 2025Updated 11 months ago
- ☆12Oct 8, 2024Updated 2 years ago
- ☆16Aug 8, 2022Updated 4 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆111Jun 17, 2023Updated 3 years ago
- Resources for the Society of Critical Care Medicine (SCCM) Datathon☆25Sep 24, 2024Updated 2 years ago
- ☆53May 2, 2021Updated 5 years ago
- Medical Concept Annotation Tool☆531Jul 25, 2025Updated last year