MedTagger is a light weight clinical NLP system built upon Apache UIMA.
☆74Apr 10, 2026Updated 3 months ago
Alternatives and similar repositories for MedTagger
Users that are interested in MedTagger are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Provides backbone infrastructure elements for OHNLP toolsets.☆14May 6, 2025Updated last year
- A Serverless Text Annotation Tool for Corpus Development☆61Feb 19, 2025Updated last year
- ☆18Oct 30, 2020Updated 5 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆64Jul 1, 2022Updated 4 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆66Jul 10, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A collaborative framework for annotating medical datasets using crowdsourcing.☆124Nov 22, 2022Updated 3 years ago
- OMOP <-> FHIR mapper☆11Mar 6, 2023Updated 3 years ago
- Transformers for Clinical NLP☆29Apr 17, 2026Updated 3 months ago
- BioMedICUS: A biomedical and clinical NLP engine.☆21Oct 22, 2025Updated 8 months ago
- ACT COVID Ontology☆15Sep 30, 2021Updated 4 years ago
- ☆23Oct 31, 2019Updated 6 years ago
- Code and webpages for our study on teaching humans to defer to an AI☆12Nov 6, 2023Updated 2 years ago
- Library for clinical NLP with spaCy.☆670Jun 4, 2026Updated last month
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆37Jan 2, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆36Jun 1, 2026Updated last month
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆20Jun 18, 2022Updated 4 years ago
- ☆12Nov 14, 2025Updated 8 months ago
- Model Context Protocol (MCP) server for mapping clinical terminology to Observational Medical Outcomes Partnership (OMOP) concepts using …☆38May 11, 2026Updated 2 months ago
- A collaborative guidebook for reusable data best practices☆13Mar 5, 2023Updated 3 years ago
- ☆16Aug 8, 2022Updated 3 years ago
- Resources for the Society of Critical Care Medicine (SCCM) Datathon☆24Sep 24, 2024Updated last year
- ☆12Oct 8, 2024Updated last year
- This is a read-only mirror of the CRAN R package repository. survival — Survival Analysis. Homepage: https://github.com/therneau/surviv…☆19Jul 10, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Evaluating LLMs for medical applications☆15Nov 30, 2023Updated 2 years ago
- ☆19Jul 9, 2026Updated last week
- Medical Concept Annotation Tool☆531Jul 25, 2025Updated 11 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆149Dec 2, 2025Updated 7 months ago
- Hadoop integration code for working with with Apache cTAKES☆10Feb 11, 2014Updated 12 years ago
- ☆24Nov 30, 2020Updated 5 years ago
- A simple REST-server around ctakes clinical pipeline.☆30Feb 10, 2017Updated 9 years ago
- An R package for interfacing with a WebAPI instance☆10Jul 2, 2026Updated 2 weeks ago
- System for Medical Concept Extraction and Linking☆449Aug 12, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- This is the code for Negation and Speculation Cue Detection and Scope Resolution using BERT, XLNet and RoBERTa☆34Jun 26, 2021Updated 5 years ago
- This repo contains the knitr code for the paper: Gillespie, C. S., et al, 2010. Analysing yeast time course microarray data using BioCond…☆12Jan 25, 2016Updated 10 years ago
- ☆11Oct 22, 2018Updated 7 years ago
- ☆32Jul 2, 2018Updated 8 years ago
- ☆24Mar 1, 2023Updated 3 years ago
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Nov 20, 2020Updated 5 years ago
- An intuitive platform for deploying the latest discoveries in healthcare AI to everybody's phones. Powered by PyTorch!☆10Aug 25, 2020Updated 5 years ago