MedTagger is a light weight clinical NLP system built upon Apache UIMA.
☆72May 5, 2025Updated 10 months ago
Alternatives and similar repositories for MedTagger
Users that are interested in MedTagger are comparing it to the libraries listed below
Sorting:
- Provides backbone infrastructure elements for OHNLP toolsets.☆14May 6, 2025Updated 10 months ago
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Dec 8, 2022Updated 3 years ago
- ☆18Oct 30, 2020Updated 5 years ago
- Clinical Language Annotation Modeling and Processing toolkit☆17Oct 10, 2016Updated 9 years ago
- ETUDE (Evaluation Tool for Unstructured Data and Extractions) is a Python-based tool that provides consistent evaluation options across a…☆12Jul 22, 2022Updated 3 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Jul 1, 2022Updated 3 years ago
- A collaborative framework for annotating medical datasets using crowdsourcing.☆124Nov 22, 2022Updated 3 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆66Jul 10, 2025Updated 8 months ago
- OMOP <-> FHIR mapper☆11Mar 6, 2023Updated 3 years ago
- ACT COVID Ontology☆15Sep 30, 2021Updated 4 years ago
- Transformers for Clinical NLP☆27Mar 11, 2026Updated last week
- ☆23Oct 31, 2019Updated 6 years ago
- Code and webpages for our study on teaching humans to defer to an AI☆12Nov 6, 2023Updated 2 years ago
- Library for clinical NLP with spaCy.☆637Aug 4, 2025Updated 7 months ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆35Jan 2, 2024Updated 2 years ago
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆19Jun 18, 2022Updated 3 years ago
- ☆12Nov 14, 2025Updated 4 months ago
- NERO-nlp is a PyPI package for biomedical Named Entity (Recognition) Ontology☆12Oct 1, 2020Updated 5 years ago
- ☆16Aug 8, 2022Updated 3 years ago
- ☆17Updated this week
- Code and Word2Vec embeddings of LOINC codes for KDD 2019 DSHealth paper "Evaluation of Embeddings of Laboratory Test Codes for Patients a…☆11Jun 13, 2024Updated last year
- Evaluating LLMs for medical applications☆15Nov 30, 2023Updated 2 years ago
- Resources for the Society of Critical Care Medicine (SCCM) Datathon☆24Sep 24, 2024Updated last year
- This is a read-only mirror of the CRAN R package repository. survival — Survival Analysis. Homepage: https://github.com/therneau/surviv…☆19Jan 17, 2026Updated 2 months ago
- Material para la asignatura de Ingeniería Web, edición 2021-22, de la Facultad de Informática UCM☆10Mar 10, 2026Updated last week
- Medical Concept Annotation Tool☆525Jul 25, 2025Updated 7 months ago
- Data structures and code to read/write BioC XML and Json.☆33Aug 21, 2023Updated 2 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆145Dec 2, 2025Updated 3 months ago
- Hadoop integration code for working with with Apache cTAKES☆10Feb 11, 2014Updated 12 years ago
- A simple REST-server around ctakes clinical pipeline.☆30Feb 10, 2017Updated 9 years ago
- An R package for interfacing with a WebAPI instance☆10Sep 5, 2025Updated 6 months ago
- Clinical Quality Language Ad-Hoc Evaluation Environment☆19Feb 4, 2023Updated 3 years ago
- System for Medical Concept Extraction and Linking☆435Aug 12, 2024Updated last year
- This repo contains the knitr code for the paper: Gillespie, C. S., et al, 2010. Analysing yeast time course microarray data using BioCond…☆13Jan 25, 2016Updated 10 years ago
- Multifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features☆17Jun 29, 2018Updated 7 years ago
- Definition and DDLs for the OMOP Common Data Model (CDM)☆1,026Nov 5, 2025Updated 4 months ago
- ☆32Jul 2, 2018Updated 7 years ago
- ☆11Oct 22, 2018Updated 7 years ago
- ☆24Mar 1, 2023Updated 3 years ago