OHDSI / NLPToolsLinks
[in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
☆33Updated last year
Alternatives and similar repositories for NLPTools
Users that are interested in NLPTools are comparing it to the libraries listed below
Sorting:
- A near real-time named-entity recognizer☆61Updated last week
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆89Updated last year
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- ACT COVID Ontology☆15Updated 3 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Data Ingestion and Harmonization☆45Updated 2 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆63Updated 4 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 8 months ago
- Oncology Working Group Repository☆57Updated 3 weeks ago
- ☆55Updated 5 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 3 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 2 months ago
- Classes for ClinicalTrials.gov related projects☆47Updated 5 years ago
- ☆65Updated 4 years ago
- ☆27Updated 7 years ago
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆173Updated 2 years ago
- The i2b2 data repository☆40Updated this week
- A generator of synthetic psychiatric notes.☆17Updated 5 years ago
- Transform the OMOP model to graph model☆22Updated 7 months ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆98Updated last year
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆14Updated 4 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆81Updated this week
- ☆15Updated 3 weeks ago
- A Serverless Text Annotation Tool for Corpus Development☆56Updated 4 months ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆65Updated last week
- Provides backbone infrastructure elements for OHNLP toolsets.☆14Updated 2 months ago
- A rule-based Python module for spitting documents into sections.☆12Updated 4 years ago
- Sample code that demonstrates the use of the NCBO REST services☆44Updated last year