[in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
☆37Jan 2, 2024Updated 2 years ago
Alternatives and similar repositories for NLPTools
Users that are interested in NLPTools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Transform the OMOP model to graph model☆28Dec 13, 2024Updated last year
- Transformers for Clinical NLP☆29Apr 17, 2026Updated 3 months ago
- The Leo framework - The VINCI-developed Natural Language Processing(NLP) infrastructure using UIMA.☆24Jun 4, 2023Updated 3 years ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆32Aug 27, 2025Updated 11 months ago
- Automation code and documentation for standing up the OHDSI toolstack in an AWS environment☆77May 16, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Expert-Curated Oncology Reports to Advance Language Model Inference☆34Apr 17, 2024Updated 2 years ago
- Python wrapper for UMLS REST API☆10Dec 17, 2018Updated 7 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆100Oct 3, 2023Updated 2 years ago
- Semantic search engine for OHDSI vocabulary☆20Jul 24, 2026Updated 2 weeks ago
- ACT COVID Ontology☆15Sep 30, 2021Updated 4 years ago
- A rule-based Python module for spitting documents into sections.☆12Nov 14, 2020Updated 5 years ago
- ☆32Jul 2, 2018Updated 8 years ago
- Time Extractor NLP project - locate dates and times in text documents☆24Oct 18, 2022Updated 3 years ago
- Dataset for the NLPMC @ NAACL 2021 Paper: Assertion Detection in Clinical Notes: Medical Language Models to the Rescue?☆16Sep 28, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆18Sep 28, 2020Updated 5 years ago
- UCSF Philter for UC☆16Jul 8, 2024Updated 2 years ago
- Ontology for Biobanking☆16Jun 11, 2025Updated last year
- De-identification of Protected Health Information according to HIPAA Privacy Rule☆41May 30, 2024Updated 2 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆32May 22, 2024Updated 2 years ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆74Jun 28, 2026Updated last month
- ☆18Oct 30, 2020Updated 5 years ago
- Hadoop integration code for working with with Apache cTAKES☆10Feb 11, 2014Updated 12 years ago
- ☆13Aug 6, 2019Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Way to run Uima Pipelines on Apache Spark☆10Jul 19, 2021Updated 5 years ago
- Supporting multi-center research requires combining data created in different data models; this community coordination project aims to pr…☆17Mar 27, 2020Updated 6 years ago
- ☆98Jul 7, 2023Updated 3 years ago
- Natural language processing pipeline for finding vitals signs in documents.☆11Jun 4, 2023Updated 3 years ago
- Preprocessing and analysis for training SNOMED-CT concept embeddings from CORD-19 corpus☆16Aug 4, 2023Updated 3 years ago
- ☆11Oct 22, 2018Updated 7 years ago
- ☆19Jul 7, 2025Updated last year
- Health NLP Examples☆89Nov 8, 2018Updated 7 years ago
- Library for clinical NLP with spaCy.☆673Jun 4, 2026Updated 2 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆52Jun 30, 2026Updated last month
- Natural Language to SQL Queries in the OMOP CDM Datasets☆11Jun 12, 2023Updated 3 years ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆25Updated this week
- ☆10May 26, 2022Updated 4 years ago
- Definition and DDLs for the OMOP Common Data Model (CDM)☆1,074Updated this week
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆74Apr 10, 2026Updated 4 months ago
- NLP scripts etc for Radiology projects☆11Jul 22, 2016Updated 10 years ago