A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
☆85Sep 4, 2025Updated 10 months ago
Alternatives and similar repositories for MedCATtrainer
Users that are interested in MedCATtrainer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Basic setup and easy to follow templates to interact and search CogStack for data analysts☆12Sep 18, 2025Updated 10 months ago
- Medical Concept Annotation Tool☆531Jul 25, 2025Updated 11 months ago
- General tutorials for the setup and use of MedCAT.☆41May 22, 2025Updated last year
- Building data processing pipelines for documents processing with NLP using Apache NiFi and related services☆59Updated this week
- Instructions and code to create for a table of UMLS, SNOMED or HPO concepts containing Dutch medical names, usable in named entity recogn…☆12Jan 20, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning☆48Jan 13, 2023Updated 3 years ago
- ☆29Feb 13, 2026Updated 5 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Jan 13, 2023Updated 3 years ago
- Running MedCAT as a RESTful web service☆22Jun 23, 2025Updated last year
- UMLS to SNOMED CT and ICD-10-CM mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED …☆16Feb 11, 2026Updated 5 months ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆76Jun 17, 2025Updated last year
- HDR UK OSS Contributions☆25Mar 6, 2025Updated last year
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Jan 17, 2022Updated 4 years ago
- FHIR Medication server that makes it easy to make medicines terminology content available as a local service.☆22Feb 12, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SNOMED CT User Interface examples☆27May 29, 2026Updated last month
- MedXN is a medication normalization system built upon Apache UIMA framework.☆25Jan 24, 2024Updated 2 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆52Mar 6, 2025Updated last year
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆59Mar 7, 2021Updated 5 years ago
- Scalable SNOMED CT Terminology Server using Elasticsearch☆378Updated this week
- Snow Owl Terminology Server. This version is no longer maintained. Please use the upstream version or the alternate Snowstorm Terminology…☆11Feb 11, 2020Updated 6 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Mar 12, 2023Updated 3 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆64Updated this week
- Streamlined Data Mapping to OMOP☆24Apr 27, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Extract TNM cancer staging from pathology notes.☆14Aug 2, 2024Updated last year
- ☆101Feb 25, 2022Updated 4 years ago
- Basic entity linker for the SNOMED EL Challenge☆15Jan 22, 2024Updated 2 years ago
- Sample relational database load scripts and SQL queries for processing SNOMED CT-AU RF2 release files.☆18Jul 17, 2024Updated 2 years ago
- VS Code Clinical Quality Language Extension☆13Jul 8, 2026Updated last week
- Publication: Linked electronic health records for research on a nationwide cohort including over 54 million people in England☆18Jun 22, 2026Updated 3 weeks ago
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Sep 18, 2025Updated 10 months ago
- OCL Terminology Service v2 in python/django☆19Updated this week
- ☆14Jun 15, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This repository contains the code used for distillation and fine-tuning of compact biomedical transformers that have been introduced in t…☆19Mar 26, 2024Updated 2 years ago
- ☆226Dec 11, 2024Updated last year
- Library for clinical NLP with spaCy.☆670Jun 4, 2026Updated last month
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆346Nov 9, 2021Updated 4 years ago
- In-BoXBART: Get Instructions into Biomedical Multi-task Learning☆15Aug 23, 2022Updated 3 years ago
- A modern, lightweight medication sig parser.☆12Jan 21, 2025Updated last year
- General purpose application server for the radar platform currently with capability to schedule push notifications☆11Updated this week