CogStack / MedCATtrainerLinks
A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
☆85Updated 2 months ago
Alternatives and similar repositories for MedCATtrainer
Users that are interested in MedCATtrainer are comparing it to the libraries listed below
Sorting:
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆90Updated 2 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆48Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆32Updated last year
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆70Updated 6 months ago
- ☆55Updated 5 years ago
- ☆100Updated 3 years ago
- A Serverless Text Annotation Tool for Corpus Development☆57Updated 8 months ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 5 years ago
- ☆18Updated 5 years ago
- ☆220Updated 11 months ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- Running MedCAT as a RESTful web service☆21Updated 4 months ago
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆102Updated 4 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆77Updated 2 years ago
- General tutorials for the setup and use of MedCAT.☆40Updated 5 months ago
- An information extraction system for free-text eligibility criteria☆38Updated 6 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆49Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆154Updated 2 years ago
- MedXN is a medication normalization system built upon Apache UIMA framework.☆24Updated last year
- Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning☆47Updated 2 years ago
- Medical Concept Annotation Tool☆513Updated 3 months ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆62Updated 3 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 3 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 5 months ago
- A near real-time named-entity recognizer☆62Updated 4 months ago
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆91Updated 3 years ago
- ☆27Updated 5 months ago
- Transformers for Clinical NLP☆25Updated 3 months ago
- Library for converting clinical trial eligibility criteria to a machine-readable format.☆176Updated 3 years ago