Alternatives and similar repositories for MedCATtrainer:

Users that are interested in MedCATtrainer are comparing it to the libraries listed below

• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• CogStack / MedCATtutorials
  General tutorials for the setup and use of MedCAT.
  ☆36Updated last month
• uf-hobi-informatics-lab / NLPreprocessing
  A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization
  ☆30Updated 9 months ago
• LHNCBC / metamaplite
  A near real-time named-entity recognizer
  ☆59Updated 9 months ago
• gmichalo / UmlsBERT
  ☆96Updated 3 years ago
• OHNLP / MedTator
  A Serverless Text Annotation Tool for Corpus Development
  ☆56Updated last week
• acadTags / Explainable-Automated-Medical-Coding
  Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)
  ☆59Updated 2 years ago
• 3mcloud / MDACE
  The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…
  ☆26Updated last year
• beamandrew / cui2vec
  ☆52Updated 4 years ago
• dchang56 / snomed_kge
  ☆26Updated 4 years ago
• CogStack / CogStack-Pipeline
  Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning
  ☆43Updated 2 years ago
• blpercha / umls-to-graph
  Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.
  ☆41Updated 4 years ago
• OHNLP / MedTagger
  MedTagger is a light weight clinical NLP system built upon Apache UIMA.
  ☆64Updated 3 months ago
• OHDSI / NLPTools
  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
  ☆32Updated last year
• Yale-LILY / Ascle
  A Python Natural Language Processing Toolkit for Medical Text Generation
  ☆76Updated 4 months ago
• CogStack / MedCATservice
  Running MedCAT as a RESTful web service
  ☆19Updated this week
• kormilitzin / med7
  ☆214Updated 2 months ago
• som-shahlab / trove
  Weakly supervised medical named entity classification
  ☆70Updated 2 years ago
• asappresearch / clip
  ☆29Updated 3 years ago
• OHDSI / Criteria2Query
  [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…
  ☆65Updated 7 months ago
• CogStack / MedCAT
  Medical Concept Annotation Tool
  ☆477Updated this week
• uf-hobi-informatics-lab / ClinicalTransformerNER
  a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms
  ☆146Updated last year
• umassbento / ehrbert
  A fine-tuned BERT using EHR notes.
  ☆14Updated 5 years ago
• rcolinp / clinical_informatics_umls
  An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…
  ☆42Updated 11 months ago
• uf-hobi-informatics-lab / SDoH_SODA
  ☆18Updated 10 months ago
• BD2KOnFHIR / NLP2FHIR
  NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications
  ☆60Updated 2 years ago
• Melbourne-BMDS / mimic34md2020_materials
  ☆22Updated 2 years ago
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆91Updated 8 months ago
• uf-hobi-informatics-lab / ClinicalTransformerRelationExtraction
  A project for developing transformer-based models for clinical relation extraction
  ☆127Updated last year
• suamin / ICD-BERT
  ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)
  ☆74Updated last year