gmichalo / UmlsBERTLinks
☆99Updated 3 years ago
Alternatives and similar repositories for UmlsBERT
Users that are interested in UmlsBERT are comparing it to the libraries listed below
Sorting:
- ☆152Updated last year
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆152Updated last year
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- A project for developing transformer-based models for clinical relation extraction☆129Updated last year
- ☆38Updated 3 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆196Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆170Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆331Updated 3 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Code for the emrQA question answering dataset☆151Updated 3 years ago
- Pre-trained Language Model for Biomedical Question Answering☆123Updated 2 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 5 months ago
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆37Updated last year
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- BioELECTRA☆50Updated 3 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 3 years ago
- ☆55Updated 5 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆178Updated 3 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆50Updated 3 years ago
- SciFive: a text-text transformer model for biomedical literature☆96Updated last year
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- PubMed 200k RCT dataset: a large dataset for sequential sentence classification.☆197Updated last year
- Python wraper for MetaMap☆174Updated 5 years ago
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆102Updated 4 years ago