☆101Feb 25, 2022Updated 4 years ago
Alternatives and similar repositories for UmlsBERT
Users that are interested in UmlsBERT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆28Jun 12, 2023Updated 3 years ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Jan 17, 2022Updated 4 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Jul 12, 2021Updated 4 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆345Nov 9, 2021Updated 4 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Jun 28, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Clinical Concept Extraction with Contextual Word Embedding☆41May 27, 2020Updated 6 years ago
- System for Medical Concept Extraction and Linking☆446Aug 12, 2024Updated last year
- Corpus of Online Medical EnTities: the cometA corpus☆52Mar 6, 2025Updated last year
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Jan 21, 2020Updated 6 years ago
- ☆38Mar 27, 2022Updated 4 years ago
- ☆55Apr 9, 2020Updated 6 years ago
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆37Jan 27, 2024Updated 2 years ago
- repository for Publicly Available Clinical BERT Embeddings☆769Aug 25, 2020Updated 5 years ago
- Semantic query and text mining tool☆21Oct 31, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆17Oct 24, 2020Updated 5 years ago
- Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…☆69Jul 19, 2021Updated 4 years ago
- A full spaCy pipeline and models for scientific/biomedical documents.☆1,973Dec 4, 2025Updated 7 months ago
- Pre-trained Language Model for Biomedical Question Answering☆126Mar 24, 2023Updated 3 years ago
- ☆10May 26, 2022Updated 4 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆114Feb 10, 2023Updated 3 years ago
- Clinical NER with UMLS lookup☆22Mar 20, 2020Updated 6 years ago
- Winners of the SNOMED CT Entity Linking Challenge☆51Apr 11, 2024Updated 2 years ago
- BioELECTRA☆51Oct 27, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tools for curating biomedical training data for large-scale language modeling☆504Dec 9, 2024Updated last year
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆231Apr 28, 2023Updated 3 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Sep 4, 2025Updated 10 months ago
- ☆224Dec 11, 2024Updated last year
- ☆72May 31, 2022Updated 4 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆21Jun 12, 2023Updated 3 years ago
- ☆31Feb 23, 2024Updated 2 years ago
- ☆71Feb 27, 2021Updated 5 years ago
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆59Mar 7, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆298Jan 12, 2022Updated 4 years ago
- Conversion from brat-flavored standoff to CoNLL format☆65Nov 26, 2020Updated 5 years ago
- Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆2,199Aug 13, 2023Updated 2 years ago
- spaCy pipeline object for negating concepts in text☆281Apr 20, 2026Updated 2 months ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆182Jul 7, 2023Updated 3 years ago
- Code for our project CROWN (Conversational Passage Ranking by Reasoning over Word Networks)☆10Jan 11, 2024Updated 2 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Sep 24, 2020Updated 5 years ago