Alternatives and similar repositories for NLP2FHIR

Users that are interested in NLP2FHIR are comparing it to the libraries listed below

• OHDSI / Athena
  Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM
  ☆61Updated 3 months ago
• OHDSI / NLPTools
  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
  ☆33Updated last year
• rorydavidson / SNOMED-CT-Database
  Represent SNOMED CT in a relational database
  ☆83Updated 2 years ago
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆81Updated this week
• omoponfhir / omoponfhir-main
  Main OMOPonFHIR Settings
  ☆45Updated 3 years ago
• OHDSI / Aphrodite
  [in development]
  ☆37Updated 3 years ago
• PheMA / cql-on-omop
  Runs CQL phenotype definitions against an OMOP repository
  ☆12Updated 2 years ago
• OHDSI / Criteria2Query
  [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…
  ☆68Updated this week
• OHNLP / MedTagger
  MedTagger is a light weight clinical NLP system built upon Apache UIMA.
  ☆69Updated last month
• callahantiff / OMOP2OBO
  OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
  ☆88Updated last year
• CogStack / MedCATservice
  Running MedCAT as a RESTful web service
  ☆22Updated this week
• OHNLP / N3C-NLP-Documentation
  Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019
  ☆21Updated 2 years ago
• uwrit / leaf
  Leaf Clinical Data Explorer
  ☆91Updated 2 months ago
• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• OHNLP / Backbone
  Provides backbone infrastructure elements for OHNLP toolsets.
  ☆14Updated last month
• OHDSI / OncologyWG
  Oncology Working Group Repository
  ☆56Updated this week
• ClarityNLP / ClarityNLP
  An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/
  ☆107Updated last year
• tmills / ctakes-docker
  ☆23Updated 5 years ago
• National-Clinical-Cohort-Collaborative / Data-Ingestion-and-Harmonization
  Data Ingestion and Harmonization
  ☆44Updated 2 months ago
• Optum / CyFHIR
  A Neo4j Plugin for Handling HL7 FHIR Data
  ☆62Updated last year
• ebegoli / SynthNotes
  A generator of synthetic psychiatric notes.
  ☆17Updated 5 years ago
• IHTSDO / sct-snapshot-rest-api
  Rest API for SNOMED CT Snapshot views, powered by Node.js, Express & MongoDB
  ☆60Updated 3 years ago
• LHNCBC / metamaplite
  A near real-time named-entity recognizer
  ☆60Updated last year
• IHTSDO / SNOMED-in-5-minutes
  Easy-to-use tutorials for accessing SNOMED APIs within 5 min using various programming languages
  ☆129Updated 5 months ago
• OHDSI / ETL-Synthea
  A package supporting the conversion from Synthea CSV to OMOP CDM
  ☆112Updated 4 months ago
• IHTSDO / snomed-query-service
  An implementation of the SNOMED CT Expression Constraint Language.
  ☆27Updated last month
• CDMFORUM / CDM-GUIDANCE
  The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…
  ☆30Updated 5 years ago
• susom / tide
  ☆15Updated this week
• BCHSI / philter-ucsf
  Open source clinical text de-identification
  ☆128Updated 10 months ago
• dermatologist / fhiry
  FHIR to pandas dataframe for data analytics, AI and ML!
  ☆37Updated last week