OHNLP / MedTatorLinks
A Serverless Text Annotation Tool for Corpus Development
☆56Updated 5 months ago
Alternatives and similar repositories for MedTator
Users that are interested in MedTator are comparing it to the libraries listed below
Sorting:
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 2 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆82Updated last week
- A near real-time named-entity recognizer☆61Updated 3 weeks ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- ☆55Updated 5 years ago
- Data structures and code to read/write BioC XML and Json.☆33Updated last year
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆330Updated 3 years ago
- ☆68Updated 3 years ago
- ☆66Updated 4 years ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- ☆99Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- Text annotation tool for team collaboration☆41Updated last year
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- Fast, world class biomedical NER☆87Updated 5 months ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆44Updated last year
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆152Updated last year
- ☆152Updated last year
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- General tutorials for the setup and use of MedCAT.☆38Updated 2 months ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆69Updated 2 weeks ago
- Transformers for Clinical NLP☆25Updated last week
- A Python Natural Language Processing Toolkit for Medical Text Generation☆81Updated 2 months ago
- Public release of the DeepPhe analytic software☆30Updated this week
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- a customzable pipeline for information extraction☆17Updated 2 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated last year
- Running MedCAT as a RESTful web service☆22Updated last month