OHNLP / MedTator
A Serverless Text Annotation Tool for Corpus Development
☆55Updated 2 months ago
Alternatives and similar repositories for MedTator:
Users that are interested in MedTator are comparing it to the libraries listed below
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆67Updated this week
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆80Updated last week
- ☆54Updated 5 years ago
- ☆64Updated 4 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated 11 months ago
- ☆67Updated 2 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- A near real-time named-entity recognizer☆59Updated 11 months ago
- ☆98Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated last year
- ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization☆27Updated 4 months ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- Biomedical Entity Linking Benchmark☆13Updated 4 months ago
- Text annotation tool for team collaboration☆41Updated last year
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 6 months ago
- Transformers for Clinical NLP☆24Updated last week
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆37Updated last year
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆160Updated 3 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- ☆59Updated last year
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 2 months ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 4 years ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- General tutorials for the setup and use of MedCAT.☆37Updated 2 weeks ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆67Updated 9 months ago