BCHSI / philter-ucsf
Open source clinical text de-identification
☆125Updated 7 months ago
Alternatives and similar repositories for philter-ucsf:
Users that are interested in philter-ucsf are comparing it to the libraries listed below
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆76Updated last week
- Mapping the MIMIC-III database to the OMOP schema☆132Updated last year
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆65Updated 8 months ago
- A version of MIMIC-IV in FHIR☆42Updated 5 months ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆67Updated 4 months ago
- Oncology Working Group Repository☆56Updated this week
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- clinical free text de-identification software☆41Updated 6 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆108Updated last year
- Winners of the SNOMED CT Entity Linking Challenge☆32Updated last year
- A Node.js framework for extracting mCODE FHIR resources☆22Updated last year
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆60Updated last month
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆43Updated last week
- A package supporting the conversion from Synthea CSV to OMOP CDM☆106Updated last month
- ☆18Updated last year
- UCSF Philter for UC☆12Updated 9 months ago
- Running MedCAT as a RESTful web service☆21Updated last month
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…