Georgetown-IR-Lab / QuickUMLSLinks
System for Medical Concept Extraction and Linking
☆414Updated last year
Alternatives and similar repositories for QuickUMLS
Users that are interested in QuickUMLS are comparing it to the libraries listed below
Sorting:
- Python wraper for MetaMap☆173Updated 5 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆333Updated 3 years ago
- Medical Concept Annotation Tool☆509Updated last month
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- ☆218Updated 9 months ago
- ☆152Updated last year
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆424Updated 2 years ago
- ☆99Updated 3 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆578Updated 2 years ago
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆597Updated 2 years ago
- Library for clinical NLP with spaCy.☆593Updated last month
- repository for Publicly Available Clinical BERT Embeddings☆733Updated 5 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 3 years ago
- A collection of papers on automated medical coding from free-texts☆147Updated 8 months ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆152Updated 2 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆172Updated 3 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆172Updated 2 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 4 months ago
- multilabel classification of EHR notes☆288Updated 5 years ago
- Code for the emrQA question answering dataset☆149Updated 3 years ago
- PubMed PICO Element Detection Dataset☆58Updated 7 years ago
- Clinical Named Entity Recognition system (CliNER) is an open-source natural language processing system for named entity recognition in cl…☆234Updated 5 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Medical Text Mining and Information Extraction with spaCy☆440Updated 2 years ago
- ☆93Updated 6 years ago
- Basic Python 3 tools to interact with UMLS lexica☆123Updated 6 years ago
- A near real-time named-entity recognizer☆61Updated 2 months ago