ncbo / ncbo_rest_sample_codeLinks
Sample code that demonstrates the use of the NCBO REST services
☆43Updated last year
Alternatives and similar repositories for ncbo_rest_sample_code
Users that are interested in ncbo_rest_sample_code are comparing it to the libraries listed below
Sorting:
- ☆55Updated 5 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 5 months ago
- Python package for machine learning for healthcare using a OMOP common data model☆110Updated 2 years ago
- Public release of the DeepPhe analytic software☆30Updated last month
- Mapping the MIMIC-III database to the OMOP schema☆142Updated last year
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆69Updated 2 weeks ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆29Updated 7 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆33Updated last year
- A near real-time named-entity recognizer☆61Updated 2 months ago
- ☆66Updated 4 years ago
- ☆152Updated last year
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆100Updated last year
- ☆98Updated 2 years ago
- init☆12Updated 10 months ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 5 years ago
- ACT COVID Ontology☆15Updated 4 years ago
- A Serverless Text Annotation Tool for Corpus Development☆57Updated 7 months ago
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆172Updated 3 years ago
- ☆70Updated 3 years ago
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆17Updated 3 years ago
- Classes for ClinicalTrials.gov related projects☆47Updated 6 years ago
- Basic Python 3 tools to interact with UMLS lexica☆123Updated 6 years ago
- Semantic query and text mining tool☆21Updated last year
- An information extraction system for free-text eligibility criteria☆38Updated 6 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆64Updated 2 months ago
- Python library for hierarchy of ICD9 Codes☆105Updated 6 years ago
- Corresponding code for experiments described in "Predicting Clinical Outcomes Across Changing Electronic Health Records." Presented at KD…☆11Updated 8 years ago
- ☆99Updated 3 years ago
- This repository contains data and code for the paper"Comparing deep learning and concept extraction based methods for patient phenotyping…☆21Updated 6 years ago