ncbo / ncbo_rest_sample_codeLinks
Sample code that demonstrates the use of the NCBO REST services
☆44Updated last year
Alternatives and similar repositories for ncbo_rest_sample_code
Users that are interested in ncbo_rest_sample_code are comparing it to the libraries listed below
Sorting:
- ☆55Updated 5 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆110Updated 2 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 3 months ago
- ☆66Updated 4 years ago
- ☆153Updated last year
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆100Updated last year
- Mapping the MIMIC-III database to the OMOP schema☆141Updated last year
- Public release of the DeepPhe analytic software☆30Updated last week
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆69Updated this week
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- A near real-time named-entity recognizer☆61Updated last month
- Python library for hierarchy of ICD9 Codes☆105Updated 6 years ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆29Updated 7 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆34Updated 5 years ago
- Corresponding code for experiments described in "Predicting Clinical Outcomes Across Changing Electronic Health Records." Presented at KD…☆11Updated 7 years ago
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆17Updated 3 years ago
- A Serverless Text Annotation Tool for Corpus Development☆57Updated 6 months ago
- init☆12Updated 8 months ago
- a Python tool to extract and structure numeric lab test comparison statements from text☆22Updated 2 years ago
- ☆98Updated 2 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆33Updated last year
- ACT COVID Ontology☆15Updated 3 years ago
- ☆69Updated 3 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆96Updated 2 months ago
- Classes for ClinicalTrials.gov related projects☆47Updated 6 years ago
- ☆41Updated 3 years ago
- An information extraction system for free-text eligibility criteria☆38Updated 6 years ago
- Python module to parse UMLS source files☆20Updated 2 years ago
- ☆99Updated 3 years ago