AIM-Harvard / SDoHLinks
Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41746-023-00970-0
☆47Updated last year
Alternatives and similar repositories for SDoH
Users that are interested in SDoH are comparing it to the libraries listed below
Sorting:
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆65Updated 4 months ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆30Updated last year
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆200Updated 5 months ago
- public code repository for paper "Health system scale language models are general purpose clinical prediction engines"☆118Updated 2 years ago
- source codes based on PyTorch to analyze EHR☆147Updated last year
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆97Updated 4 months ago
- all scripts used in gatortron project☆125Updated 2 years ago
- Med-BERT, contextualized embedding model for structured EHR data☆307Updated last year
- Clinical text summarization by adapting large language models☆149Updated last year
- Code for BEHRT: Transformer for Electronic Health Records☆116Updated 2 years ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆157Updated this week
- ☆19Updated 4 months ago
- ☆63Updated 2 years ago
- General tutorials for the setup and use of MedCAT.☆40Updated 5 months ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 5 months ago
- [npj Digital Medicine 2025] Multiple Embedding Model for EHR (MEME) used for strong prediction on Emergency Department tasks☆17Updated 4 months ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆86Updated last week
- ☆42Updated 2 years ago
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆113Updated last year
- Code repository for the framework to engage in clinical decision making task using the MIMIC-CDM dataset.☆44Updated 9 months ago
- Blog post on Medium☆50Updated 3 years ago
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆137Updated 2 months ago
- ☆29Updated 4 years ago
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 4 years ago
- ☆45Updated 2 years ago
- Code repository to create the MIMIC-CDM Dataset.☆39Updated 9 months ago
- Implements ChatGPT API via request package.☆46Updated 2 years ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆70Updated last year
- A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks☆162Updated 10 months ago
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆41Updated last month