AIM-Harvard / SDoHLinks
Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41746-023-00970-0
☆48Updated last year
Alternatives and similar repositories for SDoH
Users that are interested in SDoH are comparing it to the libraries listed below
Sorting:
- Expert-Curated Oncology Reports to Advance Language Model Inference☆30Updated last year
- source codes based on PyTorch to analyze EHR☆147Updated last year
- Med-BERT, contextualized embedding model for structured EHR data☆308Updated last year
- all scripts used in gatortron project☆128Updated 2 years ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆202Updated 6 months ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆97Updated 5 months ago
- public code repository for paper "Health system scale language models are general purpose clinical prediction engines"☆119Updated 2 years ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆66Updated 5 months ago
- ☆19Updated 4 months ago
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆140Updated 3 months ago
- Code for BEHRT: Transformer for Electronic Health Records☆118Updated 2 years ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆159Updated this week
- Training HuggingFace models on EHR data☆34Updated last month
- [npj Digital Medicine 2025] Multiple Embedding Model for EHR (MEME) used for strong prediction on Emergency Department tasks☆17Updated 4 months ago
- Clinical text summarization by adapting large language models☆150Updated last year
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆113Updated last year
- General tutorials for the setup and use of MedCAT.☆40Updated 6 months ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 6 months ago
- ☆45Updated 2 years ago
- ☆42Updated 2 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆111Updated 2 years ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆90Updated last month
- Code repository for the framework to engage in clinical decision making task using the MIMIC-CDM dataset.☆45Updated 9 months ago
- ☆29Updated 4 years ago
- ☆63Updated 2 years ago
- Patient Code & Text Representation Learning☆20Updated 2 years ago
- ☆80Updated 8 months ago
- A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks☆165Updated 10 months ago
- Almanac: Retrieval-Augmented Language Models for Clinical Medicine☆37Updated last year
- Code repository to create the MIMIC-CDM Dataset.☆40Updated 9 months ago