beamandrew / cui2vec
☆52Updated 4 years ago
Alternatives and similar repositories for cui2vec:
Users that are interested in cui2vec are comparing it to the libraries listed below
- ☆96Updated 2 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- Public release of the DeepPhe analytic software☆30Updated last year
- A near real-time named-entity recognizer☆59Updated 7 months ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆40Updated 4 years ago
- Data structures and code to read/write BioC XML and Json.☆31Updated last year
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆64Updated 5 months ago
- Semantic query and text mining tool☆22Updated last year
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 4 years ago
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆98Updated 8 months ago
- https://celehs.github.io/PheCAP/☆21Updated 3 years ago
- ☆64Updated 3 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆30Updated 7 months ago
- A Serverless Text Annotation Tool for Corpus Development☆53Updated last month
- This repository contains data and code for the paper"Comparing deep learning and concept extraction based methods for patient phenotyping…☆21Updated 6 years ago
- ☆38Updated 2 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆76Updated this week
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Sample code that demonstrates the use of the NCBO REST services☆41Updated last year
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆99Updated 4 years ago
- Retrieve and process PubTator annotations☆43Updated last year
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 2 years ago
- ☆145Updated last year
- Repository for student projects within biomedical text mining from Lund University☆50Updated last year
- ☆28Updated 3 years ago
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆13Updated 2 years ago
- ☆64Updated 2 years ago
- a module to calculate the MeSH similarity☆24Updated 3 years ago
- An information extraction system for free-text eligibility criteria☆36Updated 6 years ago