susom / tideLinks
☆15Updated 2 months ago
Alternatives and similar repositories for tide
Users that are interested in tide are comparing it to the libraries listed below
Sorting:
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆89Updated last year
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆83Updated last week
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆69Updated last week
- Open source clinical text de-identification☆140Updated last year
- Oncology Working Group Repository☆57Updated this week
- Mapping the MIMIC-III database to the OMOP schema☆141Updated last year
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 3 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated this week
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 3 years ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆115Updated 6 months ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆33Updated last year
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆110Updated 2 years ago
- ☆66Updated 4 years ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆67Updated 5 months ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆64Updated last month
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- Winners of the SNOMED CT Entity Linking Challenge☆40Updated last year
- ☆55Updated 5 years ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated last year
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT …☆14Updated 2 years ago
- General tutorials for the setup and use of MedCAT.☆39Updated 3 months ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆100Updated last year
- Public release of the DeepPhe analytic software☆30Updated last week
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆32Updated last year
- Leaf Clinical Data Explorer☆93Updated 4 months ago
- A near real-time named-entity recognizer☆61Updated last month
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year