cthoyt / umls_downloaderLinks
Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically
☆41Updated last year
Alternatives and similar repositories for umls_downloader
Users that are interested in umls_downloader are comparing it to the libraries listed below
Sorting:
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆48Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆47Updated 3 weeks ago
- ☆70Updated 3 years ago
- UMLS Graph database for semantic queries☆26Updated 3 years ago
- A near real-time named-entity recognizer☆63Updated 3 weeks ago
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆44Updated last year
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 5 years ago
- Python module to parse UMLS source files☆20Updated 2 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆200Updated last year
- Fast, world class biomedical NER☆87Updated 11 months ago
- a module to calculate the MeSH similarity☆27Updated 4 years ago
- A Serverless Text Annotation Tool for Corpus Development☆57Updated 11 months ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 4 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆93Updated 2 years ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆55Updated 2 weeks ago
- ☆130Updated 3 years ago
- Build a medical knowledge graph based on Unified Language Medical System (UMLS)☆26Updated 4 years ago
- a customzable pipeline for information extraction☆18Updated 8 months ago
- AIONER☆62Updated last year
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆71Updated 8 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated 4 months ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆201Updated last year
- ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine☆75Updated last week
- General tutorials for the setup and use of MedCAT.☆41Updated 8 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆88Updated 3 years ago
- Data structures and code to read/write BioC XML and Json.☆33Updated 2 years ago
- Text annotation tool for team collaboration☆43Updated 2 years ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆31Updated last year
- ☆24Updated 5 years ago