Alternatives and similar repositories for umls_downloader

Users that are interested in umls_downloader are comparing it to the libraries listed below

• rcolinp / clinical_informatics_umls
  An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…
  ☆44Updated last year
• gyorilab / gilda
  Grounding of biomedical named entities with contextual disambiguation
  ☆44Updated 2 months ago
• dbmi-pitt / UMLS-Graph
  UMLS Graph database for semantic queries
  ☆23Updated 2 years ago
• LHNCBC / SemRep
  ☆70Updated 3 years ago
• dhchenx / umls-graph
  Build a medical knowledge graph based on Unified Language Medical System (UMLS)
  ☆22Updated 3 years ago
• DATEXIS / UMLSParser
  Python module to parse UMLS source files
  ☆20Updated 2 years ago
• blpercha / umls-to-graph
  Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.
  ☆41Updated 5 years ago
• callahantiff / PheKnowLator
  PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
  ☆194Updated last year
• DiseaseOntology / SymptomOntology
  The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…
  ☆42Updated last year
• LHNCBC / metamaplite
  A near real-time named-entity recognizer
  ☆61Updated 2 months ago
• luozhhub / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆26Updated 3 years ago
• callahantiff / OMOP2OBO
  OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
  ☆91Updated 2 years ago
• bionlplab / bioc
  Data structures and code to read/write BioC XML and Json.
  ☆32Updated 2 years ago
• Aitslab / EasyNER
  a customzable pipeline for information extraction
  ☆17Updated 4 months ago
• AstraZeneca / KAZU
  Fast, world class biomedical NER
  ☆87Updated 7 months ago
• CogStack / MedCATtutorials
  General tutorials for the setup and use of MedCAT.
  ☆40Updated 4 months ago
• dhchenx / umls-similarity
  Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)
  ☆16Updated 3 years ago
• OHNLP / MedTator
  A Serverless Text Annotation Tool for Corpus Development
  ☆57Updated 7 months ago
• RTXteam / RTX-KG2
  Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
  ☆48Updated 3 weeks ago
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆85Updated last month
• chenzxlabhzau / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆26Updated 4 years ago
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆78Updated 3 years ago
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆29Updated last year
• ncbi / AIONER
  AIONER
  ☆61Updated last year
• bio-ontology-research-group / machine-learning-with-ontologies
  ☆131Updated 2 years ago
• acadTags / Rare-disease-identification
  Rare disease identification from free-text clinical notes with ontologies and weak supervision
  ☆32Updated 2 years ago
• mims-harvard / ClinVec
  ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine
  ☆71Updated last month
• bio-ontology-research-group / opa2vec
  Turning Ontologies Plus Annotation Properties into Vectors
  ☆35Updated 5 years ago
• dmis-lab / BERN2
  BERN2: an advanced neural biomedical namedentity recognition and normalization tool
  ☆196Updated last year
• biolink / biolink-model-toolkit
  A collection of useful python functions for looking up information and working with the Biolink Model
  ☆24Updated last month