Alternatives and similar repositories for Criteria2Query

Users that are interested in Criteria2Query are comparing it to the libraries listed below

• MIT-LCP / mimic-omop
  Mapping the MIMIC-III database to the OMOP schema
  ☆136Updated last year
• callahantiff / OMOP2OBO
  OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
  ☆88Updated last year
• OHDSI / OncologyWG
  Oncology Working Group Repository
  ☆56Updated this week
• OHNLP / N3C-NLP-Documentation
  Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019
  ☆21Updated 2 years ago
• OHNLP / MedTagger
  MedTagger is a light weight clinical NLP system built upon Apache UIMA.
  ☆69Updated last month
• beamandrew / cui2vec
  ☆55Updated 5 years ago
• lisavirginia / clinical-abbreviations
  ☆64Updated 4 years ago
• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• OHDSI / NLPTools
  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
  ☆33Updated last year
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆108Updated 2 years ago
• OHDSI / PhenotypeLibrary
  A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…
  ☆47Updated 2 months ago
• National-Clinical-Cohort-Collaborative / Phenotype_Data_Acquisition
  The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream
  ☆63Updated 3 weeks ago
• OHDSI / MIMIC
  MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…
  ☆80Updated 2 weeks ago
• OHDSI / Athena
  Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM
  ☆61Updated 3 months ago
• OHDSI / Apollo
  [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)
  ☆14Updated last year
• OHDSI / Usagi
  Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.
  ☆97Updated last year
• uwrit / leaf
  Leaf Clinical Data Explorer
  ☆91Updated 2 months ago
• uf-hobi-informatics-lab / SDoH_SODA
  ☆18Updated last year
• kdpsingh / clinspacy
  Clinical Natural Language Processing using spaCy, scispacy, and medspacy
  ☆100Updated last year
• susom / tide
  ☆15Updated this week
• LHNCBC / metamaplite
  A near real-time named-entity recognizer
  ☆60Updated last year
• OHDSI / CohortDiagnostics
  An R package for performing various cohort diagnostics.
  ☆46Updated last week
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆81Updated this week
• Melbourne-BMDS / mimic34md2020_materials
  ☆22Updated 2 years ago
• OHDSI / PheValuator
  An R package for evaluating phenotype algorithms.
  ☆18Updated 8 months ago
• OHDSI / PatientLevelPrediction
  An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.
  ☆198Updated last week
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆94Updated last year
• OHDSI / Themis
  Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …
  ☆28Updated 7 months ago
• OHDSI / Tutorial-CDM
  Training materials for Vocabulary & CDM Tutorial.
  ☆21Updated 5 years ago
• Tian312 / EliIE
  An information extraction system for free-text eligibility criteria
  ☆37Updated 6 years ago