[In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed against OMOP CDM
☆78Mar 1, 2026Updated 2 months ago
Alternatives and similar repositories for Criteria2Query
Users that are interested in Criteria2Query are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Oct 11, 2022Updated 3 years ago
- ☆68Jan 5, 2022Updated 4 years ago
- An information extraction system for free-text eligibility criteria☆38Jan 12, 2019Updated 7 years ago
- Public release of the DeepPhe analytic software☆30Nov 26, 2025Updated 6 months ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆128Mar 23, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package for evaluating phenotype algorithms.☆22Apr 10, 2026Updated last month
- PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development☆126May 12, 2026Updated 2 weeks ago
- ☆16Oct 16, 2023Updated 2 years ago
- A near real-time named-entity recognizer☆66May 20, 2026Updated last week
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆56Apr 9, 2026Updated last month
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆107Mar 28, 2024Updated 2 years ago
- A generator of synthetic psychiatric notes.☆18Apr 22, 2020Updated 6 years ago
- ☆23Oct 31, 2019Updated 6 years ago
- ☆18Apr 30, 2026Updated 3 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Source code for KDD 2020 paper COMPOSE: Cross-Modal Pseudo-Siamese Network for Patient Trial Matching.☆19Aug 26, 2020Updated 5 years ago
- Code to build the Target Central Resource Database (TCRD).☆11Jul 20, 2021Updated 4 years ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Feb 23, 2026Updated 3 months ago
- Library to extract embeddings for DNA sequences using BioFM genomics foundation model☆20Aug 13, 2025Updated 9 months ago
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆315May 15, 2026Updated last week
- [in development]☆41Jun 25, 2021Updated 4 years ago
- Use machine learning to find patterns of similar eligibility protocol criteria for clinical trials☆19Jan 9, 2019Updated 7 years ago
- A Docker container that includes the OHDSI WebAPI (running in Apache Tomcat) and the OHDSI web applications.☆10Nov 2, 2022Updated 3 years ago
- Code and data for TrialGPT.☆159Jan 24, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- DrugBank dataset files in R dataframes☆16Jan 19, 2025Updated last year
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Dec 8, 2022Updated 3 years ago
- Health Analytics Data-to-Evidence Suite (HADES): A collection of R packages for performing analytics against the Common Data Model.☆28Apr 10, 2026Updated last month
- Model Context Protocol (MCP) server for mapping clinical terminology to Observational Medical Outcomes Partnership (OMOP) concepts using …☆35May 11, 2026Updated 2 weeks ago
- Anthropic api wrapper for Go☆12Jun 28, 2024Updated last year
- [ISMB 2024] Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models☆64Apr 4, 2024Updated 2 years ago
- This is a LaTeX template for JAMIA.☆23May 4, 2024Updated 2 years ago
- Clinical Research Informatics☆13Aug 23, 2023Updated 2 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆157Mar 12, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- R Shiny app to develop ggplot2 with live plotting and downloadable code and plot files.