Winners of the SNOMED CT Entity Linking Challenge
☆50Apr 11, 2024Updated 2 years ago
Alternatives and similar repositories for snomed-ct-entity-linking
Users that are interested in snomed-ct-entity-linking are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Basic entity linker for the SNOMED EL Challenge☆14Jan 22, 2024Updated 2 years ago
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Mar 5, 2024Updated 2 years ago
- Running MedCAT as a RESTful web service☆22Jun 23, 2025Updated 11 months ago
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆14Jan 10, 2021Updated 5 years ago
- ☆29Feb 13, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A tool for generating clinical notes using Synthea patient FHIR Bundles☆15Jun 24, 2025Updated 11 months ago
- UMLS to SNOMED CT and ICD-10-CM mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED …☆15Feb 11, 2026Updated 3 months ago
- Building data processing pipelines for documents processing with NLP using Apache NiFi and related services☆57May 21, 2026Updated last week
- ☆14Apr 14, 2026Updated last month
- Snow Owl Terminology Server. This version is no longer maintained. Please use the upstream version or the alternate Snowstorm Terminology…☆11Feb 11, 2020Updated 6 years ago
- ☆28May 13, 2024Updated 2 years ago
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆17Jul 20, 2025Updated 10 months ago
- Example Health is a conceptual healthcare/insurance type company. This repository contains the tools we used to populate the databases w…☆21Jul 24, 2020Updated 5 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Apr 2, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Expression Constraint Language examples showing how ECL can be used to traverse SNOMED CT-AU/AMT and facilitate powerful data querying.☆17Mar 7, 2019Updated 7 years ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆16Sep 28, 2020Updated 5 years ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆30Nov 18, 2017Updated 8 years ago
- An implementation of the SNOMED CT Expression Constraint Language.☆27May 6, 2026Updated 3 weeks ago
- The goal of the current application is to extract Concept-Value pairs for metrics measured during an echocardiogram study. The input is a…☆18Jun 4, 2023Updated 2 years ago
- A modern, lightweight medication sig parser.☆12Jan 21, 2025Updated last year
- Sample relational database load scripts and SQL queries for processing SNOMED CT-AU RF2 release files.☆18Jul 17, 2024Updated last year
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆63May 19, 2026Updated last week
- FHIR Medication server that makes it easy to make medicines terminology content available as a local service.☆22Feb 12, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This repository contains the complete source code of the MedTAG annotation tool. MedTAG is a biomedical annotation tool for tagging biome…☆12Jan 1, 2023Updated 3 years ago
- A version of MIMIC-IV in FHIR☆54Oct 28, 2024Updated last year
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆86Sep 4, 2025Updated 8 months ago
- ☆68Feb 27, 2021Updated 5 years ago
- A pipe friendly way to interact with an OMOP Common Data Model☆15Apr 2, 2026Updated last month
- Parse Symcat (http://www.symcat.com) symptoms and conditions and generate valid Synthea (https://github.com/synthetichealth/synthea) modu…☆16Jan 28, 2021Updated 5 years ago
- The main vantage6 repository: code for the central server, nodes, CLI and Python Client☆46Updated this week
- ☆101Feb 25, 2022Updated 4 years ago
- Representation of Clinical Practice Guideline Recommendations in FHIR☆18May 13, 2026Updated 2 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Snowstorm Lite FHIR Terminology Server☆33May 19, 2026Updated last week
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Jan 17, 2022Updated 4 years ago
- Developer project for getting basic API integrations working in under 5 minutes☆11May 22, 2026Updated last week
- An autocompleter package used by the PHR project and lforms widget☆21Sep 16, 2025Updated 8 months ago
- ETL engine to transform openEHR into OMOP. Loads OMOCL configuration files.☆16Mar 9, 2026Updated 2 months ago
- Work on using Retrieval-Augmented Generation (RAG) to combine Fast Healthcare Interoperable Resources (FHIR) with Generative AI.☆114Apr 2, 2024Updated 2 years ago
- Informed Clinical Decision Making using Deep Learning☆15Mar 15, 2025Updated last year