Alternatives and similar repositories for snomed-ct-entity-linking

Users that are interested in snomed-ct-entity-linking are comparing it to the libraries listed below

• CogStack / Foresight
  Deep Generative Modelling of Patient Timelines using Electronic Health Records
  ☆63Updated last week
• CogStack / MedCATtutorials
  General tutorials for the setup and use of MedCAT.
  ☆37Updated last month
• kind-lab / mimic-fhir
  A version of MIMIC-IV in FHIR
  ☆42Updated 7 months ago
• tomolopolis / SNOMED-CT_Analysis
  Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work
  ☆12Updated 4 years ago
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆45Updated last year
• OHDSI / MIMIC
  MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…
  ☆80Updated 2 weeks ago
• IHTSDO / llm-chain-entity-extraction
  ☆24Updated 2 weeks ago
• CogStack / MedCATservice
  Running MedCAT as a RESTful web service
  ☆22Updated this week
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆29Updated last year
• som-shahlab / ehrshot-benchmark
  A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
  ☆176Updated 2 weeks ago
• dotimplement / HealthChain
  The missing middleware layer in healthcare AI 💫 🏥
  ☆37Updated this week
• 3mcloud / MDACE
  The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…
  ☆29Updated last year
• UMEssen / FHIR-PYrate
  FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…
  ☆66Updated 5 months ago
• OHDSI / Apollo
  [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)
  ☆14Updated last year
• StefanoTrv / simple_icd_10_CM
  A simple python library for ICD-10-CM codes
  ☆68Updated last week
• dermatologist / pyomop
  Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!
  ☆43Updated this week
• kaneplusplus / icd-10-cm-embedding
  LLM Embeddings for ICD 10 Data
  ☆51Updated 6 months ago
• uf-hobi-informatics-lab / SDoH_SODA
  ☆18Updated last year
• lisavirginia / clinical-abbreviations
  ☆64Updated 4 years ago
• Medical-Event-Data-Standard / meds
  Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data
  ☆62Updated last month
• Yale-LILY / Ascle
  A Python Natural Language Processing Toolkit for Medical Text Generation
  ☆81Updated last month
• cthoyt / umls_downloader
  Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically
  ☆40Updated last year
• Lybarger / sdoh_extraction
  ☆18Updated last year
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆81Updated this week
• anand-subu / automated-clinical-coding-llm
  ☆18Updated last year
• BCHSI / philter-ucsf
  Open source clinical text de-identification
  ☆129Updated 10 months ago
• OHDSI / Athena
  Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM
  ☆61Updated 3 months ago
• Melbourne-BMDS / mimic34md2020_materials
  ☆22Updated 2 years ago
• apache / ctakes
  Apache cTAKES is a Natural Language Processing (NLP) platform for clinical text.
  ☆82Updated this week
• uf-hobi-informatics-lab / GatorTron
  all scripts used in gatortron project
  ☆118Updated last year