Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.
☆40Aug 28, 2020Updated 6 years ago
Alternatives and similar repositories for umls-to-graph
Users that are interested in umls-to-graph are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- UMLS Graph database for semantic queries☆26Jan 11, 2023Updated 3 years ago
- Load all concepts and relationships from UMLS into a Neo4j database☆13Jan 29, 2021Updated 5 years ago
- Python wrapper for UMLS REST API☆10Dec 17, 2018Updated 7 years ago
- A near real-time named-entity recognizer☆66Sep 1, 2026Updated 3 weeks ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆90Jan 13, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆23May 11, 2020Updated 6 years ago
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆27Feb 21, 2025Updated last year
- Collation of Intro R material, R for STEPH, R for SME, and R for ASME - 2022☆12May 4, 2022Updated 4 years ago
- Library that supports the Mapping Master DSL for mapping spreadsheets to OWL ontologies☆66Feb 19, 2025Updated last year
- Python library for hierarchy of ICD9 Codes☆105Dec 3, 2018Updated 7 years ago
- pytorch-retain☆13Nov 20, 2017Updated 8 years ago
- Developer project for getting basic API integrations working in under 5 minutes☆11May 22, 2026Updated 4 months ago
- System for Medical Concept Extraction and Linking☆453Aug 12, 2024Updated 2 years ago
- A tutorial for the ROBOT command line tool.☆17Sep 24, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆55Mar 20, 2024Updated 2 years ago
- ☆15Aug 24, 2022Updated 4 years ago
- ☆13Feb 2, 2026Updated 7 months ago
- UMLS in Python with MongoDB.☆18Aug 5, 2026Updated last month
- UMLS to SNOMED CT and ICD-10-CM mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED …☆16Feb 11, 2026Updated 7 months ago
- FHIR Ontop OMOP Implementation☆21May 8, 2024Updated 2 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆43Jun 19, 2026Updated 3 months ago
- ☆72Sep 3, 2026Updated 2 weeks ago
- Code that drives the public web-based tools for the Media Cloud Online News Archive and Directory.☆12Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆346Nov 9, 2021Updated 4 years ago
- Health NLP Examples☆89Nov 8, 2018Updated 7 years ago
- Concept2vec Metrics for Evaluating Quality of Embeddings for Ontological Concepts☆16Oct 22, 2018Updated 7 years ago
- Transform the OMOP model to graph model☆28Dec 13, 2024Updated last year
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆173Aug 17, 2022Updated 4 years ago
- Revision Management for the Semantic Web☆21Nov 17, 2020Updated 5 years ago
- Data2Evidence is an end-to-end solution for management and analysis of OMOP data - https://data2evidence.org☆43Updated this week
- An ontology matcher for matching entities between knowledgebases☆74Nov 28, 2022Updated 3 years ago
- ☆101Feb 25, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A high-throughput ontology-based pipeline for data integration☆16May 17, 2023Updated 3 years ago
- PyPI Package: An easy-to-use medication/drug code mapping tool☆21Aug 17, 2023Updated 3 years ago
- This library allows for accessing the Cyc ontology from Ruby language.☆15Aug 21, 2015Updated 11 years ago
- Double Descent results for FCNNs on MNIST, extended by Label Noise (Reconciling Modern Machine-Learning Practice and the Classical Bias–V…☆15Oct 24, 2023Updated 2 years ago
- FHIR Medication server that makes it easy to make medicines terminology content available as a local service.☆22Feb 12, 2021Updated 5 years ago
- FTRL-Proximal Online Learning Algorithm☆15May 22, 2017Updated 9 years ago
- Code for the CIKM 2013 paper "Discovering Coherent Topics Using General Knowledge"☆11Jul 14, 2014Updated 12 years ago