Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and relies on a tailored scalable transformer architecture.
☆267Jul 24, 2025Updated 11 months ago
Alternatives and similar repositories for proteina
Users that are interested in proteina are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The Family of Diffusion Protein Language Models (DPLM)☆339Jul 25, 2025Updated 11 months ago
- A standardized protein design benchmark for motif-scaffolding problems☆81Updated this week
- Sidechain conditioning and modeling for full-atom protein sequence design☆142Nov 11, 2025Updated 7 months ago
- ☆231Mar 2, 2024Updated 2 years ago
- Public Release of ProGen3 family of Models☆111Jul 21, 2025Updated 11 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Diffusion-based all-atom protein generative model.☆237Aug 27, 2025Updated 10 months ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆424Jul 3, 2023Updated 2 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆193Jun 24, 2024Updated 2 years ago
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆299Sep 23, 2025Updated 9 months ago
- ☆593Feb 6, 2025Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆326Jul 19, 2024Updated last year
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆127May 27, 2025Updated last year
- A generalized computational framework for biomolecular modeling.☆428Jun 11, 2026Updated 2 weeks ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆291Dec 10, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆140Jun 3, 2025Updated last year
- User friendly and accurate binder design pipeline☆1,145May 11, 2026Updated last month
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆530Mar 22, 2026Updated 3 months ago
- ☆118Jan 3, 2026Updated 5 months ago
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning☆24Mar 19, 2025Updated last year
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,974May 6, 2026Updated last month
- ☆61May 29, 2025Updated last year
- Making Protein Design accessible to all via Google Colab!☆918Apr 6, 2026Updated 2 months ago
- ☆256Feb 12, 2026Updated 4 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆60Jul 22, 2025Updated 11 months ago
- Structure-conditioned masked language modeling for protein sequence design☆73Jan 31, 2024Updated 2 years ago
- ☆40Mar 30, 2025Updated last year
- Official repository for the ProteinGym benchmarks☆440Mar 25, 2026Updated 3 months ago
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆838Jun 12, 2026Updated 2 weeks ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆131Nov 19, 2025Updated 7 months ago
- Baseline model for PPB-Affinity benchmark data☆42May 21, 2025Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆258Mar 26, 2026Updated 3 months ago
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆107May 25, 2025Updated last year
- Inference code for RFdiffusion2☆433Apr 3, 2026Updated 2 months ago
- List of papers about Proteins Design using Deep Learning☆1,936Jun 20, 2026Updated last week
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆100Oct 15, 2025Updated 8 months ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆365Jun 29, 2023Updated 2 years ago
- Official repository of EnzymeFlow☆102Dec 7, 2024Updated last year
- A Unified Evaluation Suite for Protein Design☆138Jan 27, 2026Updated 5 months ago