Alternatives and similar repositories for boltzgen

Users that are interested in boltzgen are comparing it to the libraries listed below

• wallnerlab / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆339Updated last week
• baker-laboratory / PLACER
  PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.
  ☆197Updated 2 weeks ago
• RosettaCommons / RFdiffusion2
  Inference code for RFdiffusion2
  ☆333Updated last week
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆206Updated 3 months ago
• ProteinDesignLab / protpardelle
  Diffusion-based all-atom protein generative model.
  ☆225Updated 2 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆311Updated last month
• ikalvet / heme_binder_diffusion
  ☆140Updated 4 months ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆165Updated last week
• yehlincho / BoltzDesign1
  ☆220Updated 3 months ago
• RosettaCommons / atomworks
  A generalized computational framework for biomolecular modeling.
  ☆321Updated 3 weeks ago
• RosettaCommons / modelforge
  Central repository for biomolecular foundation models with shared trainers and pipeline components
  ☆188Updated 2 months ago
• plinder-org / plinder
  Protein Ligand INteraction Dataset and Evaluation Resource
  ☆257Updated 5 months ago
• RosettaCommons / RFantibody
  ☆366Updated 2 weeks ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆234Updated 3 months ago
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆245Updated 3 weeks ago
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆270Updated last year
• TencentAI4S / IgGM
  Official Implementation of IgGM
  ☆159Updated last month
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆208Updated 6 months ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆272Updated 2 years ago
• uw-ipd / RoseTTAFold2
  ☆201Updated 6 months ago
• levinthal / Pallatom
  ☆126Updated 5 months ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆148Updated 6 months ago
• Zuricho / ProteinDesignLabs
  List of computational protein design research labs
  ☆209Updated 9 months ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆164Updated last month
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆164Updated last year
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆323Updated last year
• colbyford / PyMOLfold
  Plugin for folding sequences directly in PyMOL
  ☆106Updated 3 months ago
• pinder-org / pinder
  PINDER: The Protein INteraction Dataset and Evaluation Resource
  ☆140Updated last year
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆166Updated last month
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 3 years ago