NUPulmonary / 2020_Grant

Related projects ⓘ

Alternatives and complementary repositories for 2020_Grant

• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆46Updated last year
• Teichlab / Pan_fetal_immune
  Collection of scripts for analysis of pan fetal immune atlas
  ☆25Updated 2 years ago
• BostonGene / MFP
  Mollecular Functional Portraits
  ☆36Updated 7 months ago
• saeyslab / NicheNet_LiverCellAtlas
  Scripts used for the Differential NicheNet analyses in the Liver Atlas paper Guilliams et al., Cell 2022
  ☆8Updated 2 years ago
• BernsteinLab / aml2019
  The following code accompanies a manuscript combining single-cell RNA-sequencing and genotyping to analyze cellular hierarchies in acute …
  ☆36Updated 4 years ago
• Coolgenome / iTALK
  ☆58Updated 5 years ago
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆33Updated 5 years ago
• cssmillie / ulcerative_colitis
  ☆59Updated 4 years ago
• bei-lab / scRNA-AHCA
  Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs
  ☆39Updated 10 months ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆27Updated 3 years ago
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆44Updated 4 years ago
• edsgard / trendsceek
  Identify genes with spatial expression trends in single-cell gene expression data
  ☆49Updated 6 years ago
• PierreBSC / Viral-Track
  ☆56Updated 4 years ago
• Single-Cell-Genomics-Group-CNAG-CRG / Tumor-Immune-Cell-Atlas
  Code repository for the Tumor Immune Cell Atlas (TICA) project
  ☆61Updated 2 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆28Updated last year
• liulab-dfci / lisa2
  ☆29Updated 2 years ago
• karthikj89 / scgenetics
  identifying disease critical cell types and programs from single cell RNAseq
  ☆51Updated 2 years ago
• meichendong / SCDC
  SCDC
  ☆42Updated last year
• Japrin / scPip
  A pipeline for scRNA-seq data analysis
  ☆12Updated 10 months ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆41Updated 9 months ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆32Updated 4 years ago
• CFeregrino / scWGCNA
  scWGCNA
  ☆55Updated 2 years ago
• KChen-lab / METAFlux
  ☆48Updated 4 months ago
• zhengtaoxiao / Single-Cell-Metabolic-Landscape
  Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data
  ☆23Updated 3 years ago
• faryabib / too-many-cells
  Cluster single cells and analyze cell clade relationships with colorful visualizations.
  ☆45Updated 3 years ago
• IzarLab / CUIMC-NYP_COVID_autopsy_lung
  ☆40Updated 3 years ago
• carmonalab / STACAS
  R package for semi-supervised single-cell data integration
  ☆75Updated 9 months ago
• KlugerLab / DAseq
  ☆39Updated 3 years ago
• lessonskit / Single-cell-RNA-sequencing-of-human-kidney
  R-code used for single-cell RNA-Seq analysis of kidney data.
  ☆17Updated 5 years ago
• jdekanter / CHETAH
  scRNA-seq cell type identification
  ☆42Updated 5 years ago