Alternatives and similar repositories for AJIVE_Project

Users that are interested in AJIVE_Project are comparing it to the libraries listed below

• BaderLab / netDx
  R package with netDx software and data for examples
  ☆12Updated 2 years ago
• daniel-munro / imageCCA
  Code for preparing and running the imageCCA method.
  ☆20Updated 8 years ago
• lingfeiwang / findr
  Fast Inference of Networks from Directed Regulations
  ☆22Updated 2 years ago
• isb-cgc / Community-Notebooks
  ☆14Updated 2 months ago
• maxconway / SNFtool
  Similarity Network Fusion
  ☆37Updated 10 years ago
• brentp / combat.py
  python / numpy / pandas / patsy version of ComBat for removing batch effects.
  ☆105Updated 6 years ago
• linzx06 / AC-PCA
  AC-PCA: simultaneously performs dimension reduction and adjustment for confounding variation
  ☆14Updated 5 years ago
• YosefLab / totalVI_reproducibility
  ☆16Updated 3 years ago
• RabadanLab / randomly
  A Library for Denoising Single-Cell Data with Random Matrix Theory
  ☆37Updated 2 years ago
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆50Updated 2 years ago
• andrewcharlesjones / cplvm
  Contrastive Poisson latent variable models (CPLVMs)
  ☆11Updated 3 years ago
• cantinilab / momix-notebook
  ☆66Updated 2 years ago
• wangshenguiuc / DeepSyn
  ☆10Updated 5 years ago
• ncchung / jackstraw
  Statistical Inference for Unsupervised Learning
  ☆16Updated 11 months ago
• willtownes / glmpca-py
  generalized principal component analysis (GLM-PCA) implemented in python
  ☆60Updated 4 years ago
• limix / struct-lmm
  Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.
  ☆14Updated 5 years ago
• greenelab / multi-plier
  An unsupervised transfer learning approach for rare disease transcriptomics
  ☆46Updated 5 years ago
• canzarlab / JVis-learn
  ☆20Updated 4 years ago
• SofieVG / FlowSOM
  Using self-organizing maps for visualization and interpretation of cytometry data
  ☆66Updated last year
• yangzi4 / iNMF
  Source code for integrative nonnegative matrix factorization
  ☆19Updated 7 years ago
• theorod93 / sCCA
  Sparse Canonical Correlation Analysis (sCCA)
  ☆20Updated 4 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆23Updated last year
• cran / SNFtool
   This is a read-only mirror of the CRAN R package repository. SNFtool — Similarity Network Fusion
  ☆23Updated 4 years ago
• BIRSBiointegration / Hackathon
  Multi-omics studies are available here
  ☆52Updated 3 years ago
• nolanlab / vortex
  VorteX Clustering Environment - Java graphical tool for single-cell analysis, clustering and visualization. Latest release:
  ☆34Updated 2 years ago
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆16Updated 2 months ago
• gerstung-lab / tensorsignatures
  A python package for learning mutational signatures and their multidimensional genomic properties
  ☆15Updated 5 years ago
• KrishnaswamyLab / scprep
  A collection of scripts and tools for loading, processing, and handling single cell data.
  ☆76Updated 2 months ago
• insitro / EmbedGEM
  EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery
  ☆22Updated last year
• omiq-ai / Multicore-opt-SNE
  Parallel opt-SNE implementation with Python wrapper
  ☆38Updated 3 years ago