giannarelli-lab / Single-Cell-Immune-Profiling-of-Atherosclerotic-PlaquesLinks
Immune Profiling of Atherosclerotic Plaques Identifies
☆9Updated last year
Alternatives and similar repositories for Single-Cell-Immune-Profiling-of-Atherosclerotic-Plaques
Users that are interested in Single-Cell-Immune-Profiling-of-Atherosclerotic-Plaques are comparing it to the libraries listed below
Sorting:
- Tools for analyzing data on the image from NanoString GeoMx Digital Spatial Profiler (DSP).☆20Updated 2 weeks ago
- Single cell analysis in regenerative lineages and immune-mediated pruning in lung cancer metastasis☆19Updated 5 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 5 years ago
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆35Updated 2 years ago
- Scripts from the GBM cellular states paper☆18Updated 4 years ago
- ☆16Updated 2 years ago
- Analysis notebooks for the Covid-19 meta analysis that accompanies the Nature Medicine publication "Single-cell meta-analysis of SARS-CoV…☆24Updated 4 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆22Updated 9 months ago
- Methods for visualization and analysis of spatially-resolved gene expression☆19Updated this week
- From IDAT to beta.☆25Updated 6 years ago
- Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.☆24Updated last month
- Reproducing all analyses and figures for the ASAP-seq paper☆29Updated 3 years ago
- ☆19Updated 5 years ago
- Tutorials for multimodal omics data analysis☆15Updated 3 months ago
- Automated marker-based annotation of cell types☆13Updated 2 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis☆46Updated 4 years ago
- A collection of project templates and useful functions for single-cell data analysis with Scanpy.☆20Updated last year
- A toolset for analysis and visualisation of Spatial Transcriptomics datasets.☆18Updated 3 years ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆45Updated last year
- ☆29Updated 6 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Updated 3 years ago
- ☆26Updated 3 years ago
- Explore and share your scRNAseq clustering results☆50Updated last year
- Post hoc cell type classification of single-cell RNA-sequencing data.☆10Updated 3 years ago
- SPATA Package for spatial gene expression analysis☆22Updated 3 years ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆57Updated 3 months ago
- identifying disease critical cell types and programs from single cell RNAseq☆56Updated 3 years ago
- Reproducing result from the paper☆33Updated 4 years ago